A database of hypoxia responsive genes in fishes
  Gene details for the gene Aryl-hydrocarbon receptor nuclear translocator 2 (Gene Id: 64277  Symbol: arnt2)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 4
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_009302938.3 XP_009301213.1 NC_007118.7 10700812 10873307  (172495) + Reference GRCz1 arnt2 A0A0R4ID51
2 MODEL XM_009302939.3 XP_009301214.1 NC_007118.7 10700812 10873307  (172495) + Reference GRCz1 arnt2 A0A0R4ID51
3 MODEL XM_009302940.3 XP_009301215.1 NC_007118.7 10700812 10873307  (172495) + Reference GRCz1 arnt2 A0A0R4ID51
4 PROVISIONAL NM_131674.1 NP_571749.1 NC_007118.7 10700812 10873307  (172495) + Reference GRCz1 arnt2 A0A0R4ID51
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
11072074 12151636 14691204 15256591 15282404 16109975 16122694 16214955 16306231 16333842 16936225 17686920 18000031 19123687 19234064 19374551 19449054 19615353 20189255 20806318 22174413 23222439 23286227 23306105 23726801 24083816 24561424 24568092 24642098 25163633 25424564 25565004 25711857 25715055 25742325 26356387 26562049 26612010 27189481 27356472 28992476 29027256 29107029 30044200
 
GO Term: 23
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIDA-response to hypoxiaProcess11072074
2Danio rerioIMP-cardiac ventricle morphogenesisProcess19374551
3Danio rerioIEA-DNA bindingFunctionNot available
4Danio rerioIDA-DNA-binding transcription factor activityFunction11072074
5Danio rerioIEA-DNA-binding transcription factor activityFunctionNot available
6Danio rerioIC-nucleusComponent11072074
7Danio rerioIEA-nucleusComponentNot available
8Danio rerioIEA-transcription factor complexComponentNot available
9Danio rerioIEA-cytoplasmComponentNot available
10Danio rerioIEA-regulation of transcription, DNA-templatedProcessNot available
11Danio rerioIDA-signal transductionProcess11072074
12Danio rerioIGI-axon guidanceProcess23222439
13Danio rerioIMP-axon guidanceProcess23222439
14Danio rerioISS-brain developmentProcessNot available
15Danio rerioIMP-diencephalon developmentProcess19234064
16Danio rerioIMP-ventricular system developmentProcess19374551
17Danio rerioIMP-hypothalamus cell differentiationProcess19234064
18Danio rerioIPI-positive regulation of transcription, DNA-templatedProcess16306231
19Danio rerioIEA-protein dimerization activityFunctionNot available
20Danio rerioIMP-swim bladder inflationProcess19374551
21Danio rerioIMP-dopaminergic neuron differentiationProcess19234064
22Danio rerioIMP-liver morphogenesisProcess19374551
23Danio rerioIMP-cell-cell adhesionProcess19123687

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