Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC) Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.

Refseq information: 4 SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID 1 MODEL XM_009302938.3 XP_009301213.1 NC_007118.7 10700812 10873307  (172495) + Reference GRCz1 arnt2 A0A0R4ID51 2 MODEL XM_009302939.3 XP_009301214.1 NC_007118.7 10700812 10873307  (172495) + Reference GRCz1 arnt2 A0A0R4ID51 3 MODEL XM_009302940.3 XP_009301215.1 NC_007118.7 10700812 10873307  (172495) + Reference GRCz1 arnt2 A0A0R4ID51 4 PROVISIONAL NM_131674.1 NP_571749.1 NC_007118.7 10700812 10873307  (172495) + Reference GRCz1 arnt2 A0A0R4ID51

mRNA analysis Promoter analysis of gene: Primere design of mRNA: Similarity search : Analysis of homologous transcript:

PubMed links

12151636 14691204 15256591 15282404 16109975 16122694 16214955 16306231 16333842 16936225 17234648 17686920 18000031 19123687 19234064 19374551 19449054 19615353 20189255 20806318 21873635 22174413 23222439 23286227 23306105 23726801 24083816 24561424 24568092 24642098 25163633 25424564 25565004 25711857 25715055 25742325 26356387 26562049 26612010 27189481 27356472 28992476 29027256 29107029 30029150 30044200 31470313 31868891 32379754

GO Term: 29 SNo. Reported in speceis Evidence Qualifier GO term Category PubMed Link 1 Danio rerio IBA enables RNA polymerase II cis-regulatory region sequence-specific DNA binding Function 21873635 2 Danio rerio IBA enables DNA-binding transcription factor activity, RNA polymerase II-specific Function 21873635 3 Danio rerio IDA involved_i response to hypoxia Process Not available 4 Danio rerio IMP acts_upstr cardiac ventricle morphogenesis Process 19374551 5 Danio rerio IEA enables DNA binding Function Not available 6 Danio rerio IDA enables DNA-binding transcription factor activity Function Not available 7 Danio rerio IEA enables DNA-binding transcription factor activity Function Not available 8 Danio rerio IBA is_active_ nucleus Component 21873635 9 Danio rerio IC located_in nucleus Component Not available 10 Danio rerio IEA located_in nucleus Component Not available 11 Danio rerio IEA part_of transcription regulator complex Component Not available 12 Danio rerio IEA located_in cytoplasm Component Not available 13 Danio rerio IDA involved_i regulation of transcription, DNA-templated Process Not available 14 Danio rerio IEA acts_upstr regulation of transcription, DNA-templated Process Not available 15 Danio rerio IBA involved_i regulation of transcription by RNA polymerase II Process 21873635 16 Danio rerio IDA involved_i signal transduction Process Not available 17 Danio rerio IGI acts_upstr axon guidance Process 23222439 18 Danio rerio IMP acts_upstr axon guidance Process 23222439 19 Danio rerio ISS involved_i brain development Process Not available 20 Danio rerio IMP acts_upstr diencephalon development Process 19234064 21 Danio rerio IMP acts_upstr ventricular system development Process 19374551 22 Danio rerio IMP acts_upstr hypothalamus cell differentiation Process 19234064 23 Danio rerio IBA part_of aryl hydrocarbon receptor complex Component 21873635 24 Danio rerio IPI acts_upstr positive regulation of transcription, DNA-templated Process 16306231 25 Danio rerio IEA enables protein dimerization activity Function Not available 26 Danio rerio IMP acts_upstr swim bladder inflation Process 19374551 27 Danio rerio IMP acts_upstr dopaminergic neuron differentiation Process 19234064 28 Danio rerio IMP acts_upstr liver morphogenesis Process 19374551 29 Danio rerio IMP acts_upstr cell-cell adhesion Process 19123687