A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Peroxisome proliferator-activated receptor alpha a (Gene Id: 563298  Symbol: pparaa)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 2
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_005164753.4 XP_005164810.1 NC_007115.7 18607702 18649343  (41641) - Reference GRCz1 pparaa Q5RGZ2
2 VALIDATED NM_001161333.1 NP_001154805.1 NC_007115.7 18607702 18649343  (41641) - Reference GRCz1 pparaa Q5RGZ2
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
9192646 15520368 17256142 17997606 20932299 20937081 21464954 21481936 21873635 22205629 22207143 22500729 22734042 23029107 23063876 23306105 23682835 24642098 24832481 25130427 25565004 25621397 25621398 25711679 26040728 26469318 26562049 26607039 26627126 26840512 27014939 27513977 27562099 27886581 28236482 28323199 28441764 28772355 28938452 29027256 29524743 29631138 29723837 29896183 30026731 30045502 30082823 30121499 30233415 30265925 30358936 30384064 30615194 30682743 30684774 30928526 30947959 31004809 31352104 31470313 31479913 31704768 31741801 31950220 32051014 32143076 32221778 32227279 32332781 32459962 32612127 32710562 32720689 32987073 32994480 33022287
 
GO Term: 21
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAinvolved_inegative regulation of transcription by RNA polymerase IIProcess21873635
2Danio rerioIBAenablesRNA polymerase II cis-regulatory region sequence-specific DNA bindingFunction21873635
3Danio rerioIBAenablesDNA-binding transcription repressor activity, RNA polymerase II-specificFunction21873635
4Danio rerioIEAenablesDNA bindingFunctionNot available
5Danio rerioIEAenablesDNA-binding transcription factor activityFunctionNot available
6Danio rerioIBAenablesnuclear receptor activityFunction21873635
7Danio rerioIEAenablesnuclear receptor activityFunctionNot available
8Danio rerioIEAlocated_innucleusComponentNot available
9Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
10Danio rerioIBAinvolved_ifatty acid metabolic processProcess21873635
11Danio rerioIEAenableszinc ion bindingFunctionNot available
12Danio rerioIBAinvolved_ihormone-mediated signaling pathwayProcess21873635
13Danio rerioIBAinvolved_inegative regulation of cholesterol storageProcess21873635
14Danio rerioIBAinvolved_iregulation of lipid metabolic processProcess21873635
15Danio rerioIBAinvolved_icell differentiationProcess21873635
16Danio rerioIBAinvolved_iresponse to lipidProcess21873635
17Danio rerioIEAenablessequence-specific DNA bindingFunctionNot available
18Danio rerioIBAinvolved_ipositive regulation of fatty acid metabolic processProcess21873635
19Danio rerioIBAinvolved_ipositive regulation of transcription by RNA polymerase IIProcess21873635
20Danio rerioIEAenablesmetal ion bindingFunctionNot available
21Danio rerioIBAinvolved_inegative regulation of inflammatory responseProcess21873635

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