A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Peroxisome proliferator-activated receptor alpha a (Gene Id: 563298  Symbol: pparaa)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 2
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_005164753.4 XP_005164810.1 NC_007115.7 18607702 18649343  (41641) - Reference GRCz1 pparaa Q5RGZ2
2 VALIDATED NM_001161333.1 NP_001154805.1 NC_007115.7 18607702 18649343  (41641) - Reference GRCz1 pparaa Q5RGZ2
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
9192646 15520368 17256142 17997606 20932299 20937081 21464954 21481936 21873635 22205629 22207143 22500729 22734042 23029107 23063876 23306105 23682835 24642098 24832481 25130427 25565004 25621397 25711679 26040728 26469318 26562049 26607039 26627126 26840512 27014939 27513977 27562099 27886581 28236482 28323199 28441764 28772355 28938452 29027256 29524743 29631138 29723837 30026731 30045502 30082823 30121499 30233415 30265925 30358936 30384064
 
GO Term: 32
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBA-negative regulation of transcription by RNA polymerase IIProcess21873635
2Danio rerioIBA-transcription regulatory region sequence-specific DNA bindingFunction21873635
3Danio rerioIBA-RNA polymerase II regulatory region sequence-specific DNA bindingFunction21873635
4Danio rerioIBA-DNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
5Danio rerioIBA-RNA polymerase II repressing transcription factor bindingFunction21873635
6Danio rerioIBA-DNA-binding transcription repressor activity, RNA polymerase II-specificFunction21873635
7Danio rerioIEA-DNA bindingFunctionNot available
8Danio rerioIEA-DNA-binding transcription factor activityFunctionNot available
9Danio rerioIEA-steroid hormone receptor activityFunctionNot available
10Danio rerioIEA-nuclear receptor activityFunctionNot available
11Danio rerioIBA-fatty acid bindingFunction21873635
12Danio rerioIBA-nucleusComponent21873635
13Danio rerioIEA-nucleusComponentNot available
14Danio rerioIEA-regulation of transcription, DNA-templatedProcessNot available
15Danio rerioIBA-fatty acid metabolic processProcess21873635
16Danio rerioIBA-multicellular organism developmentProcess21873635
17Danio rerioIBA-transcription factor bindingFunction21873635
18Danio rerioIBA-drug bindingFunction21873635
19Danio rerioIEA-zinc ion bindingFunctionNot available
20Danio rerioIBA-lipid bindingFunction21873635
21Danio rerioIBA-hormone-mediated signaling pathwayProcess21873635
22Danio rerioIBA-negative regulation of cholesterol storageProcess21873635
23Danio rerioIBA-regulation of lipid metabolic processProcess21873635
24Danio rerioIBA-cell differentiationProcess21873635
25Danio rerioIBA-nuclear receptor transcription coactivator activityFunction21873635
26Danio rerioIBA-response to lipidProcess21873635
27Danio rerioIBA-signaling receptor activityFunction21873635
28Danio rerioIEA-sequence-specific DNA bindingFunctionNot available
29Danio rerioIBA-negative regulation of transcription, DNA-templatedProcess21873635
30Danio rerioIBA-positive regulation of transcription by RNA polymerase IIProcess21873635
31Danio rerioIEA-metal ion bindingFunctionNot available
32Danio rerioIBA-RNA polymerase II transcription factor complexComponent21873635

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