A database of hypoxia responsive genes in fishes
 
  Gene details for the gene CREB binding protein b (Gene Id: 567111  Symbol: crebbpb)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 7
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_009299165.3 XP_009297440.1 NW_018394546.1 218219 302600  (84381) - Reference GRCz1 crebbpb A0A0R4IVZ7
2 MODEL XM_009299166.3 XP_009297441.1 NW_018394546.1 218219 302600  (84381) - Reference GRCz1 crebbpb A0A0R4IVZ7
3 MODEL XM_009299167.3 XP_009297442.1 NW_018394546.1 218219 302600  (84381) - Reference GRCz1 crebbpb A0A0R4IVZ7
4 MODEL XM_021472879.1 XP_021328554.1 NC_007114.7 9638766 9723360  (84594) - Reference GRCz1 crebbpb A0A0R4IVZ7
5 MODEL XM_021472888.1 XP_021328563.1 NC_007114.7 9638766 9723360  (84594) - Reference GRCz1 crebbpb A0A0R4IVZ7
6 MODEL XM_021472891.1 XP_021328566.1 NC_007114.7 9638766 9723360  (84594) - Reference GRCz1 crebbpb A0A0R4IVZ7
7 VALIDATED NM_001365186.1 NP_001352115.1 - 0 0  (0) ? - crebbpb A0A0R4IVZ7
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
17997606 19500364 21172930 21873635 24240475 26260685 26908177 27189481 29399383 29409755 30444999 30615915 32818549
 
GO Term: 20
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBApart_ofhistone acetyltransferase complexComponent21873635
2Danio rerioIEApart_ofhistone acetyltransferase complexComponentNot available
3Danio rerioIEAenablestranscription coregulator activityFunctionNot available
4Danio rerioIBAenablestranscription coactivator activityFunction21873635
5Danio rerioIEAenablestranscription coactivator activityFunctionNot available
6Danio rerioIBAenableshistone acetyltransferase activityFunction21873635
7Danio rerioIEAenableshistone acetyltransferase activityFunctionNot available
8Danio rerioIEAlocated_innucleusComponentNot available
9Danio rerioIBApart_oftranscription regulator complexComponent21873635
10Danio rerioIEAlocated_incytoplasmComponentNot available
11Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
12Danio rerioIEAenableszinc ion bindingFunctionNot available
13Danio rerioIBAinvolved_ihistone acetylationProcess21873635
14Danio rerioIEAacts_upstrhistone acetylationProcessNot available
15Danio rerioIEAenablestransferase activityFunctionNot available
16Danio rerioIEAenablesacyltransferase activityFunctionNot available
17Danio rerioIBAenableschromatin DNA bindingFunction21873635
18Danio rerioIBAinvolved_ipositive regulation of transcription by RNA polymerase IIProcess21873635
19Danio rerioIEAenablesmetal ion bindingFunctionNot available
20Danio rerioIEAacts_upstrrhythmic processProcessNot available

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