A database of hypoxia responsive genes in fishes
  Gene details for the gene CREB binding protein a (Gene Id: 566841  Symbol: crebbpa)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 7
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_005161769.4 XP_005161826.1 NC_007133.7 26702787 26790742  (87955) + Reference GRCz1 crebbpa A0A0R4IPF2
2 MODEL XM_005161770.4 XP_005161827.1 NC_007133.7 26702787 26790742  (87955) + Reference GRCz1 crebbpa A0A0R4IPF2
3 MODEL XM_005161771.4 XP_005161828.1 NC_007133.7 26702787 26790742  (87955) + Reference GRCz1 crebbpa A0A0R4IPF2
4 MODEL XM_021473516.1 XP_021329191.1 NW_018395113.1 7722 60809  (53087) + Reference GRCz1 crebbpa A0A0R4IPF2
5 MODEL XM_021473517.1 XP_021329192.1 NW_018395113.1 7722 60809  (53087) + Reference GRCz1 crebbpa A0A0R4IPF2
6 MODEL XM_021473518.1 XP_021329193.1 NW_018395113.1 7722 60809  (53087) + Reference GRCz1 crebbpa A0A0R4IPF2
7 SUPPRESSED NM_001089455.2 - - 0 0  (0) ? - crebbpa A0A0R4IPF2
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
PubMed links
12618376 15520368 16109975 17997606 19500364 21873635 24240475 25947162 26260685 26908177 27009152 28824436 29399383 29409755 29488319 30615915 30844417 31708779 32260203 32818549 33129255
GO Term: 23
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBApart_ofhistone acetyltransferase complexComponent21873635
2Danio rerioIEApart_ofhistone acetyltransferase complexComponentNot available
3Danio rerioIMPacts_upstrhematopoietic progenitor cell differentiationProcess24240475
4Danio rerioIEAenablestranscription coregulator activityFunctionNot available
5Danio rerioIBAenablestranscription coactivator activityFunction21873635
6Danio rerioIEAenablestranscription coactivator activityFunctionNot available
7Danio rerioIBAenableshistone acetyltransferase activityFunction21873635
8Danio rerioIEAenableshistone acetyltransferase activityFunctionNot available
9Danio rerioIDAlocated_innucleusComponent26260685
10Danio rerioIEAlocated_innucleusComponentNot available
11Danio rerioIBApart_oftranscription regulator complexComponent21873635
12Danio rerioIDAlocated_incytoplasmComponent26260685
13Danio rerioIEAlocated_incytoplasmComponentNot available
14Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
15Danio rerioIEAenableszinc ion bindingFunctionNot available
16Danio rerioIBAinvolved_ihistone acetylationProcess21873635
17Danio rerioIEAacts_upstrhistone acetylationProcessNot available
18Danio rerioIEAenablestransferase activityFunctionNot available
19Danio rerioIEAenablesacyltransferase activityFunctionNot available
20Danio rerioIBAenableschromatin DNA bindingFunction21873635
21Danio rerioIBAinvolved_ipositive regulation of transcription by RNA polymerase IIProcess21873635
22Danio rerioIEAenablesmetal ion bindingFunctionNot available
23Danio rerioIEAacts_upstrrhythmic processProcessNot available

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