Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC) Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.

Refseq information: 2 SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID 1 MODEL XM_009297698.3 XP_009295973.1 NC_007136.7 2198602 2254111  (55509) + Reference GRCz1 pparab K7DY57 2 PROVISIONAL NM_001102567.1 NP_001096037.1 NC_007136.7 2198602 2254111  (55509) + Reference GRCz1 pparab K7DY57

mRNA analysis Promoter analysis of gene: Primere design of mRNA: Similarity search : Analysis of homologous transcript:

PubMed links

9192646 15616845 15964169 16990399 17256142 17997606 20416398 21464954 21481936 21722753 21873635 22152339 22205629 22207143 22302940 22500729 22871059 23416188 23499292 23988502 24130815 24424211 24552713 24832481 25711679 26040728 26183212 26469318 26572131 26583037 26828895 27562099 27599007 27697757 27776230 28217809 28441764 28888875 29286302 29448196 29678641 30082823 30279329 30358936 30384064 30448747 30482436 30500751 30618751 30660906 30721868 30849589 30928526 30950260 31004821 31018538 31182918 31317780 31349543 31372513 31384916 31470313 31479913 31493468 31574395 31600704 31609598 31741801 31918190 31950220 32051014 32116709 32203715 32283355 32346285 32387861 32446740 32470728 32710562 32987073 33022287

GO Term: 23 SNo. Reported in speceis Evidence Qualifier GO term Category PubMed Link 1 Danio rerio IBA involved_i negative regulation of transcription by RNA polymerase II Process 21873635 2 Danio rerio IBA enables RNA polymerase II cis-regulatory region sequence-specific DNA binding Function 21873635 3 Danio rerio IBA enables DNA-binding transcription repressor activity, RNA polymerase II-specific Function 21873635 4 Danio rerio IEA enables DNA binding Function Not available 5 Danio rerio IEA enables DNA-binding transcription factor activity Function Not available 6 Danio rerio IBA enables nuclear receptor activity Function 21873635 7 Danio rerio IEA enables nuclear receptor activity Function Not available 8 Danio rerio IEA located_in nucleus Component Not available 9 Danio rerio IEA acts_upstr regulation of transcription, DNA-templated Process Not available 10 Danio rerio IBA involved_i fatty acid metabolic process Process 21873635 11 Danio rerio IEA enables zinc ion binding Function Not available 12 Danio rerio IBA involved_i hormone-mediated signaling pathway Process 21873635 13 Danio rerio IBA involved_i negative regulation of cholesterol storage Process 21873635 14 Danio rerio IDA acts_upstr response to activity Process 16990399 15 Danio rerio IBA involved_i regulation of lipid metabolic process Process 21873635 16 Danio rerio IBA involved_i cell differentiation Process 21873635 17 Danio rerio IBA involved_i response to lipid Process 21873635 18 Danio rerio IEA enables sequence-specific DNA binding Function Not available 19 Danio rerio IBA involved_i positive regulation of fatty acid metabolic process Process 21873635 20 Danio rerio IBA involved_i positive regulation of transcription by RNA polymerase II Process 21873635 21 Danio rerio IEA enables metal ion binding Function Not available 22 Danio rerio IBA involved_i negative regulation of inflammatory response Process 21873635 23 Danio rerio IDA acts_upstr cellular response to cold Process 16990399