A database of hypoxia responsive genes in fishes
  Gene details for the gene Peroxisome proliferator-activated receptor alpha b (Gene Id: 557714  Symbol: pparab)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 2
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_009297698.3 XP_009295973.1 NC_007136.7 2198602 2254111  (55509) + Reference GRCz1 pparab K7DY57
2 PROVISIONAL NM_001102567.1 NP_001096037.1 NC_007136.7 2198602 2254111  (55509) + Reference GRCz1 pparab K7DY57
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
9192646 15616845 15964169 16990399 17256142 17997606 20416398 21464954 21481936 21722753 21873635 22152339 22205629 22207143 22302940 22500729 22871059 23416188 23499292 23988502 24130815 24424211 24552713 24832481 25711679 26040728 26183212 26469318 26572131 26583037 26828895 27562099 27599007 27697757 27776230 28441764 28888875 29286302 29448196 29678641 30082823 30279329 30358936 30384064
 
GO Term: 34
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBA-negative regulation of transcription by RNA polymerase IIProcess21873635
2Danio rerioIBA-transcription regulatory region sequence-specific DNA bindingFunction21873635
3Danio rerioIBA-RNA polymerase II regulatory region sequence-specific DNA bindingFunction21873635
4Danio rerioIBA-DNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
5Danio rerioIBA-RNA polymerase II repressing transcription factor bindingFunction21873635
6Danio rerioIBA-DNA-binding transcription repressor activity, RNA polymerase II-specificFunction21873635
7Danio rerioIEA-DNA bindingFunctionNot available
8Danio rerioIEA-DNA-binding transcription factor activityFunctionNot available
9Danio rerioIEA-steroid hormone receptor activityFunctionNot available
10Danio rerioIEA-nuclear receptor activityFunctionNot available
11Danio rerioIBA-fatty acid bindingFunction21873635
12Danio rerioIBA-nucleusComponent21873635
13Danio rerioIEA-nucleusComponentNot available
14Danio rerioIEA-regulation of transcription, DNA-templatedProcessNot available
15Danio rerioIBA-fatty acid metabolic processProcess21873635
16Danio rerioIBA-multicellular organism developmentProcess21873635
17Danio rerioIBA-transcription factor bindingFunction21873635
18Danio rerioIBA-drug bindingFunction21873635
19Danio rerioIEA-zinc ion bindingFunctionNot available
20Danio rerioIBA-lipid bindingFunction21873635
21Danio rerioIBA-hormone-mediated signaling pathwayProcess21873635
22Danio rerioIBA-negative regulation of cholesterol storageProcess21873635
23Danio rerioIDA-response to activityProcess16990399
24Danio rerioIBA-regulation of lipid metabolic processProcess21873635
25Danio rerioIBA-cell differentiationProcess21873635
26Danio rerioIBA-nuclear receptor transcription coactivator activityFunction21873635
27Danio rerioIBA-response to lipidProcess21873635
28Danio rerioIBA-signaling receptor activityFunction21873635
29Danio rerioIEA-sequence-specific DNA bindingFunctionNot available
30Danio rerioIBA-negative regulation of transcription, DNA-templatedProcess21873635
31Danio rerioIBA-positive regulation of transcription by RNA polymerase IIProcess21873635
32Danio rerioIEA-metal ion bindingFunctionNot available
33Danio rerioIDA-cellular response to coldProcess16990399
34Danio rerioIBA-RNA polymerase II transcription factor complexComponent21873635

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