A database of hypoxia responsive genes in fishes
  Gene details for the gene Endothelial PAS domain protein 1b (Gene Id: 555192  Symbol: epas1b)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 3
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 VALIDATED NM_001039806.2 NP_001034895.2 NC_007124.7 8381003 8446340  (65337) - Reference GRCz1 epas1b B3DJD1
2 VALIDATED NM_001039806.2 NP_001034895.2 NW_018394864.1 41649 106986  (65337) - Reference GRCz1 epas1b B3DJD1
3 VALIDATED NM_001039806.2 NP_001034895.2 NW_018395305.1 231856 297331  (65475) - Reference GRCz1 epas1b B3DJD1
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
12477932 16997637 19123687 19449054 20571107 20952382 21343420 21546908 21873635 22684503 23461336 24196071 24613281 24613356 24683187 25000307 25205386 25730270 25866969 26052946 26454018 26933814 27189481 27222589 27249651 27323909 28285553 28624236 29036334 29339404 30126845
 
GO Term: 18
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIDA-transcription regulatory region sequence-specific DNA bindingFunction25000307
2Danio rerioIBA-DNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
3Danio rerioIEP-response to hypoxiaProcess21343420
4Danio rerioIBA-nucleusComponent21873635
5Danio rerioIEA-nucleusComponentNot available
6Danio rerioIEA-regulation of transcription, DNA-templatedProcessNot available
7Danio rerioIBA-regulation of transcription by RNA polymerase IIProcess21873635
8Danio rerioIEP-response to activityProcess21343420
9Danio rerioIMP-neuron differentiationProcess21546908
10Danio rerioIMP-exocrine pancreas developmentProcess25000307
11Danio rerioIMP-regulation of neuron apoptotic processProcess21546908
12Danio rerioIBA-positive regulation of transcription by RNA polymerase IIProcess21873635
13Danio rerioIEA-protein dimerization activityFunctionNot available
14Danio rerioIMP-digestive tract developmentProcess25000307
15Danio rerioIGI-neuron apoptotic processProcess19123687
16Danio rerioIGI-neuronal stem cell population maintenanceProcess27323909
17Danio rerioIMP-neuronal stem cell population maintenanceProcess27323909
18Danio rerioIMP-embryonic liver developmentProcess25000307

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