Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC) Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.

Refseq information: 1 SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID 1 PROVISIONAL NM_001003983.1 NP_001003983.1 NC_007118.7 44445594 44467881  (22287) + Reference GRCz1 cdh5 Q68SP4

mRNA analysis Promoter analysis of gene: Primere design of mRNA: Similarity search : Analysis of homologous transcript:

PubMed links

12477932 15305301 15802528 15849270 16193492 16251212 16321372 16336046 16469878 16719917 17043243 17125762 17409396 17531218 17646580 17722983 17911384 18032732 18094332 18292601 18342303 18832752 18835554 19093037 19151727 19308258 19345098 19503615 19504456 19542019 19590046 20098718 20154733 20364122 20549745 20736288 21389051 21429983 21429985 21641336 21654806 21750034 21802375 21865323 21873635 21896630 22007135 22079115 22119054 22227723 22438865 22516065 22581286 22634317 22649102 22668851 22750409 22837470 23000899 23285103 23341543 23418350 23456338 23520166 23575676 23698350 23719382 23763948 23863480 23959107 24008197 24021482 24146748 24247081 24277077 24306108 24603875 24699544 24767999 24806444 24823359 24905975 25027310 25056693 25100833 25104355 25214579 25373898 25428693 25450186 25564648 25584798 25722433 25739401 25884426 25931248 25969392 25992545 26017639 26051280 26092845 26150473 26153247 26174808 26253536 26257178 26358189 26369932 26385351 26469318 26476142 26650936 26657775 26671342 26814702 27094430 27156384 27158029 27499523 27549025 27562099 27581547 27637381 27638855 27799363 28003365 28007601 28082451 28087636 28112401 28137359 28242613 28264837 28279709 28300168 28372831 28394883 28429770 28459441 28576875 28598490 28602865 28619820 28878000 29037991 29123087 29168762 29232705 29284606 29364115 29414790 29651289 29724820 29744287 29757409 29905858 30006544 30171187 30188605 30309860 30451830 30924555 30953479 31006651 31064821 31097478 31156639 31242036 31705559 31711643 32032546 32070236 32169726 32247151 32493965 32628937 32831172 33060638 33087700 33230303

GO Term: 35 SNo. Reported in speceis Evidence Qualifier GO term Category PubMed Link 1 Danio rerio IBA involved_i cell morphogenesis Process 21873635 2 Danio rerio IBA involved_i vasculature development Process 21873635 3 Danio rerio IGI acts_upstr vasculature development Process 28112401 4 Danio rerio IEA acts_upstr blood vessel maturation Process Not available 5 Danio rerio IMP acts_upstr sprouting angiogenesis Process 19345098 6 Danio rerio IBA enables calcium ion binding Function 21873635 7 Danio rerio IEA enables calcium ion binding Function Not available 8 Danio rerio IEA located_in plasma membrane Component Not available 9 Danio rerio IBA is_active_ adherens junction Component 21873635 10 Danio rerio IBA is_active_ bicellular tight junction Component 21873635 11 Danio rerio IBA involved_i cell-cell junction assembly Process 21873635 12 Danio rerio IEA acts_upstr cell adhesion Process Not available 13 Danio rerio IEA acts_upstr homophilic cell adhesion via plasma membrane adhesion molecules Process Not available 14 Danio rerio IBA involved_i multicellular organism development Process 21873635 15 Danio rerio IMP acts_upstr heart development Process 20098718 16 Danio rerio IMP acts_upstr unidimensional cell growth Process 25373898 17 Danio rerio IEA located_in membrane Component Not available 18 Danio rerio IEA located_in integral component of membrane Component Not available 19 Danio rerio IBA involved_i calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules Process 21873635 20 Danio rerio IBA part_of catenin complex Component 21873635 21 Danio rerio IMP acts_upstr negative regulation of angiogenesis Process 19345098 22 Danio rerio IBA involved_i adherens junction organization Process 21873635 23 Danio rerio IMP acts_upstr cell-cell junction organization Process 30171187 24 Danio rerio IBA enables cadherin binding Function 21873635 25 Danio rerio IEA enables metal ion binding Function Not available 26 Danio rerio IMP acts_upstr cerebellum vasculature development Process 28429770 27 Danio rerio IMP acts_upstr blood vessel lumenization Process 20736288 28 Danio rerio IEA acts_upstr cell-cell adhesion Process Not available 29 Danio rerio IBA involved_i cell-cell adhesion via plasma-membrane adhesion molecules Process 21873635 30 Danio rerio IMP acts_upstr angiogenic sprout fusion Process 28264837 31 Danio rerio IGI acts_upstr cell adhesion involved in sprouting angiogenesis Process 28264837 32 Danio rerio IGI acts_upstr regulation of vasculature development Process 29744287 33 Danio rerio IMP acts_upstr blood vessel endothelial cell delamination involved in blood vessel lumen ensheathment Process 23698350 34 Danio rerio IMP acts_upstr endothelial tube lumen extension involved in blood vessel lumen ensheathment Process 23698350 35 Danio rerio IBA involved_i regulation of establishment of cell polarity Process 21873635