A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Egl-9 family hypoxia-inducible factor 3 (Gene Id: 406602  Symbol: egln3)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 2
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_005169814.4 XP_005169871.1 NC_007128.7 9911972 9936942  (24970) - Reference GRCz1 egln3 Q6NY85
2 PROVISIONAL NM_213310.1 NP_998475.1 NC_007128.7 9911972 9936942  (24970) - Reference GRCz1 egln3 Q6NY85
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
12477932 16872691 19158186 19304954 20952382 21555741 21873635 22665266 23341543 23663776 23919627 24128854 24196071 24367256 25470057 25840431 25866969 26040990 26283463 26298234 26469318 26559940 26681691 27181905 27189481 27578788 28524872 28851829 28982700 29036334 30031069 30335980 31121539 31468037 31501519 31743664 31780949 32237262 32284789 32379754 32669312 32963106 33060638
 
GO Term: 14
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIEAenablesiron ion bindingFunctionNot available
2Danio rerioIBAis_active_nucleusComponent21873635
3Danio rerioIBAis_active_cytoplasmComponent21873635
4Danio rerioIBAenablesferrous iron bindingFunction21873635
5Danio rerioIEAenablesoxidoreductase activityFunctionNot available
6Danio rerioIEAenablesoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygeFunctionNot available
7Danio rerioIBAinvolved_ipeptidyl-proline hydroxylation to 4-hydroxy-L-prolineProcess21873635
8Danio rerioIEAenablesL-ascorbic acid bindingFunctionNot available
9Danio rerioIBAenablespeptidyl-proline dioxygenase activityFunction21873635
10Danio rerioIBAenablespeptidyl-proline 4-dioxygenase activityFunction21873635
11Danio rerioIEAenablesmetal ion bindingFunctionNot available
12Danio rerioIMPacts_upstrnegative regulation of defense response to virusProcess32669312
13Danio rerioIEAenablesdioxygenase activityFunctionNot available
14Danio rerioIBAinvolved_icellular response to hypoxiaProcess21873635

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