Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC) Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.

Refseq information: 4 SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID 1 MODEL XM_009292018.3 XP_009290293.1 NC_007127.7 4287538 4317954  (30416) - Reference GRCz1 vegfaa O73682 2 MODEL XR_002455712.1 - NC_007127.7 4287538 4317954  (30416) - Reference GRCz1 vegfaa O73682 3 VALIDATED NM_001110349.2 NP_001103819.2 NC_007127.7 4287538 4317954  (30416) - Reference GRCz1 vegfaa O73682 4 VALIDATED NM_131408.3 NP_571483.1 NC_007127.7 4287538 4317954  (30416) - Reference GRCz1 vegfaa O73682

mRNA analysis Promoter analysis of gene: Primere design of mRNA: Similarity search : Analysis of homologous transcript:

PubMed links

11119306 12110173 12477932 12539040 12782653 14592839 14710191 14732488 15097998 15183302 15522741 15721310 15882579 15936346 15998812 16107477 16109975 16110501 16174743 16251212 16321372 16448862 16537812 16565716 16617120 16684661 16753140 16807025 16807888 16914384 16921028 16968815 17698971 18094332 18305039 18326814 18366745 18442396 18656453 18664627 18996177 19269286 19304954 19332767 19422911 19542015 19789285 19815777 20096681 20142328 20156556 20185799 20335444 20364122 20453160 20511544 20571107 20605922 20686605 20815916 20952382 20977546 21112197 21114664 21343420 21364913 21385766 21429983 21550419 21572418 21654806 21670146 21748787 21857967 21873635 21937602 21949834 22001438 22007135 22138660 22353712 22516065 22649102 22668851 22707269 22711017 22729936 22816610 22884368 22903062 23018578 23106130 23132244 23147754 23212515 23220656 23223443 23236128 23324349 23333559 23341992 23421720 23454196 23469178 23554940 23591790 23639444 23663822 23708556 23720233 23744542 23744993 23805247 23959107 24128854 24131633 24264597 24440334 24568569 24850928 24871948 24940000 25001479 25026365 25056693 25092676 25117453 25119047 25147179 25347788 25379465 25428693 25450186 25470057 25519729 25526262 25617435 25617839 25768009 25784557 25978439 26017639 26066004 26168398 26184137 26194803 26271225 26276677 26369931 26386379 26391449 26463632 26477558 26483474 26559940 26568398 26584608 26657775 26728351 26769101 26821951 26905425 26908177 26969382 26993167 27189481 27249651 27499207 27499523 27557946 27562099 27578780 27581547 27616026 27638855 27647901 27696620 27777301 27802896 27846817 27852438 27916465 27989824 27993976 28002765 28007601 28071661 28087636 28087639 28098558 28118600 28192065 28230770 28279709 28300168 28323199 28332618 28392885 28395729 28459441 28525947 28534941 28547797 28601011 28602865 28621424 28624236 28775072 28813666 28855341 28982700 29037991 29126989 29176804 29221954 29257949 29284606 29329032 29432853 29483572 29568059 29670362 29707605 29744287 29757409 29777134 29866703 29883909 29886729 29966290 30006544 30102439 30104362 30126845 30195867 30274782 30308157 30396905 30463267 30542405 30685670 30705153 30760708 30792658 30796893 30825427 30837605 30890523 30944477 30953479 31006646 31070548 31167777 31199673 31242036 31278918 31311575 31398778 31433980 31501519 31557631 31597659 31702554 31734314 31743664 31820205 31885126 31936539 31983425 31997350 32135341 32169726 32247151 32275659 32284789 32289526 32412410 32423801 32450337 32503295 32550907 32570883 32576859 32706844 32736679 32877671 32944400 33060638 33271969

GO Term: 63 SNo. Reported in speceis Evidence Qualifier GO term Category PubMed Link 1 Danio rerio IDA acts_upstr angiogenesis Process Not available 2 Danio rerio IEA acts_upstr angiogenesis Process Not available 3 Danio rerio IGI acts_upstr angiogenesis Process 16617120 4 Danio rerio IMP acts_upstr angiogenesis Process 16617120 5 Danio rerio IMP involved_i angiogenesis Process Not available 6 Danio rerio IMP acts_upstr blood vessel development Process 16968815 7 Danio rerio IGI acts_upstr branching involved in blood vessel morphogenesis Process 19542015 8 Danio rerio IMP acts_upstr branching involved in blood vessel morphogenesis Process 11119306 9 Danio rerio IDA acts_upstr vasculogenesis Process Not available 10 Danio rerio IMP acts_upstr vasculogenesis Process 12110173 11 Danio rerio IMP involved_i vasculogenesis Process Not available 12 Danio rerio IBA involved_i response to hypoxia Process 21873635 13 Danio rerio IBA involved_i positive regulation of protein phosphorylation Process 21873635 14 Danio rerio IBA involved_i positive regulation of endothelial cell proliferation Process 21873635 15 Danio rerio ISS involved_i positive regulation of endothelial cell proliferation Process Not available 16 Danio rerio IGI acts_upstr vasculature development Process Not available 17 Danio rerio IMP acts_upstr vasculature development Process 22884368 18 Danio rerio IBA involved_i sprouting angiogenesis Process 21873635 19 Danio rerio IGI acts_upstr sprouting angiogenesis Process 16537812 20 Danio rerio IMP acts_upstr sprouting angiogenesis Process 19815777 21 Danio rerio IDA acts_upstr blood vessel endothelial cell proliferation involved in sprouting angiogenesis Process 16537812 22 Danio rerio IGI acts_upstr endocardial progenitor cell migration to the midline involved in heart field formation Process 21385766 23 Danio rerio IMP acts_upstr cardioblast migration to the midline involved in heart rudiment formation Process 28230770 24 Danio rerio IBA enables vascular endothelial growth factor receptor binding Function 21873635 25 Danio rerio IPI enables protein binding Function 15183302 26 Danio rerio IEA located_in extracellular region Component Not available 27 Danio rerio IBA is_active_ extracellular space Component 21873635 28 Danio rerio IDA acts_upstr activation of phospholipase C activity Process 16537812 29 Danio rerio IEA acts_upstr multicellular organism development Process Not available 30 Danio rerio IMP acts_upstr regulation of heart contraction Process 15998812 31 Danio rerio IGI acts_upstr motor neuron axon guidance Process 16110501 32 Danio rerio IBA enables growth factor activity Function 21873635 33 Danio rerio IEA enables growth factor activity Function Not available 34 Danio rerio IMP enables growth factor activity Function Not available 35 Danio rerio IEA enables heparin binding Function Not available 36 Danio rerio IDA acts_upstr response to glucose Process 26276677 37 Danio rerio IEA located_in membrane Component Not available 38 Danio rerio IMP acts_upstr central nervous system vasculogenesis Process 29037991 39 Danio rerio IDA acts_upstr hemopoiesis Process Not available 40 Danio rerio IMP involved_i hemopoiesis Process Not available 41 Danio rerio IEA acts_upstr cell differentiation Process Not available 42 Danio rerio IMP acts_upstr thyroid gland development Process 16968815 43 Danio rerio ISS involved_i positive regulation of protein-containing complex assembly Process Not available 44 Danio rerio IMP acts_upstr regulation of angioblast cell migration involved in selective angioblast sprouting Process 19815777 45 Danio rerio IMP acts_upstr angioblast cell migration from lateral mesoderm to midline Process Not available 46 Danio rerio IMP acts_upstr dorsal aorta development Process 29037991 47 Danio rerio IBA involved_i vascular endothelial growth factor signaling pathway Process 21873635 48 Danio rerio IBA enables chemoattractant activity Function 21873635 49 Danio rerio IBA enables vascular endothelial growth factor receptor 1 binding Function 21873635 50 Danio rerio IDA acts_upstr protein kinase B signaling Process 16537812 51 Danio rerio IBA involved_i positive regulation of angiogenesis Process 21873635 52 Danio rerio IMP acts_upstr positive regulation of angiogenesis Process 23132244 53 Danio rerio IBA involved_i vascular endothelial growth factor receptor signaling pathway Process 21873635 54 Danio rerio IGI acts_upstr vascular endothelial growth factor receptor signaling pathway Process 12110173 55 Danio rerio IMP acts_upstr pronephros development Process 16753140 56 Danio rerio IMP acts_upstr artery morphogenesis Process 19815777 57 Danio rerio ISS involved_i positive regulation of peptidyl-tyrosine phosphorylation Process Not available 58 Danio rerio IBA involved_i induction of positive chemotaxis Process 21873635 59 Danio rerio IEA acts_upstr positive regulation of cell division Process Not available 60 Danio rerio ISS involved_i positive regulation of focal adhesion assembly Process Not available 61 Danio rerio IBA involved_i positive regulation of mast cell chemotaxis Process 21873635 62 Danio rerio IMP acts_upstr venous blood vessel development Process 29037991 63 Danio rerio IGI acts_upstr regulation of vasculature development Process 22884368