A database of hypoxia responsive genes in fishes
  Gene details for the gene Hypoxia inducible factor 1 subunit alpha inhibitor (Gene Id: 114137999  Symbol: hif1an)

Xiphophorus couchianus     [Monterrey platyfish]     Family:Poeciliidae    Habitat: Freshwater    Conservation status (2015): Endangered (EN)
Occurrence and distribution Endemic: Mexico
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Girardinus; Dactylophallus.
Refseq information: 1
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_028006941.1 XP_027862742.1 NC_040249.1 10802483 10812140  (9657) + Reference X_cou hif1an -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 32
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBA-nucleusComponent21873635
2Danio rerioIEA-nucleusComponentNot available
3Danio rerioISScolocalizenucleusComponentNot available
4Danio rerioIBA-cytoplasmComponent21873635
5Danio rerioIEA-cytoplasmComponentNot available
6Danio rerioISS-cytoplasmComponentNot available
7Danio rerioISS-zinc ion bindingFunctionNot available
8Danio rerioIEA-oxidoreductase activityFunctionNot available
9Danio rerioIBA-oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygeFunction21873635
10Danio rerioIGI-regulation of vascular endothelial growth factor receptor signaling pathwayProcess25347788
11Danio rerioISS-carboxylic acid bindingFunctionNot available
12Danio rerioIBA-peptidyl-histidine hydroxylationProcess21873635
13Danio rerioISS-peptidyl-histidine hydroxylationProcessNot available
14Danio rerioIBA-peptidyl-histidine dioxygenase activityFunction21873635
15Danio rerioISS-peptidyl-histidine dioxygenase activityFunctionNot available
16Danio rerioIBA-peptidyl-asparagine 3-dioxygenase activityFunction21873635
17Danio rerioISS-peptidyl-asparagine 3-dioxygenase activityFunctionNot available
18Danio rerioIBA-peptidyl-aspartic acid hydroxylationProcess21873635
19Danio rerioISS-peptidyl-aspartic acid hydroxylationProcessNot available
20Danio rerioIBA-peptidyl-asparagine hydroxylationProcess21873635
21Danio rerioISS-peptidyl-asparagine hydroxylationProcessNot available
22Danio rerioISS-protein homodimerization activityFunctionNot available
23Danio rerioIBA-negative regulation of Notch signaling pathwayProcess21873635
24Danio rerioIEA-metal ion bindingFunctionNot available
25Danio rerioISS-cofactor bindingFunctionNot available
26Danio rerioISS-perinuclear region of cytoplasmComponentNot available
27Danio rerioIEA-dioxygenase activityFunctionNot available
28Danio rerioIEA-oxidation-reduction processProcessNot available
29Danio rerioIBA-negative regulation of transcription from RNA polymerase II promoter in response to hypoxiaProcess21873635
30Danio rerioIBA-ankyrin repeat bindingFunction21873635
31Danio rerioIDA-negative regulation of vasculature developmentProcess25347788
32Danio rerioIMP-negative regulation of vasculature developmentProcess25347788

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