A database of hypoxia responsive genes in fishes
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Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
Similarity search
mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
About Database
Gene details for the gene Endothelial PAS domain protein 1 (Gene Id: 113542372 Symbol: epas1)
Pangasianodon hypophthalmus
[Striped catfish]
Family:
Pangasiidae
Habitat:
Freshwater
Conservation status (2015):
Endangered (EN)
Occurrence and distribution
Questionable:
China
Introduced:
Bangladesh, Philippines, Singapore, Myanmar
Native:
Thailand, Vietnam, Laos, Cambodia
Not established:
Taiwan
Systematics
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae.
Refseq information: 4
SNo.
Status
RNA nucleotide accession
Protein accession
Genomic nucleotide accession
Start position on genomic DNA
End position on genomic DNA
Orientation
Assembly
Symbol
UniProtkb ID
1
MODEL
XM_026939868.2
XP_026795669.1
NC_047597.1
21348209
21384115 (35906)
-
Reference GENO_
epas1b
-
2
MODEL
XM_026939875.2
XP_026795676.1
NC_047597.1
21348209
21384115 (35906)
-
Reference GENO_
epas1b
-
3
MODEL
XM_026939881.2
XP_026795682.1
NC_047597.1
21348209
21384115 (35906)
-
Reference GENO_
epas1b
-
4
MODEL
XM_034302815.1
XP_034158706.1
NC_047597.1
21348209
21384115 (35906)
-
Reference GENO_
epas1b
-
mRNA analysis
Promoter analysis of gene:
Primere design of mRNA:
Similarity search :
Analysis of homologous transcript:
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