A database of hypoxia responsive genes in fishes
Home
Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
Similarity search
mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
About Database
Gene details for the gene Peroxisome proliferator activated receptor alpha (Gene Id: 113532092 Symbol: ppara)
Pangasianodon hypophthalmus
[Striped catfish]
Family:
Pangasiidae
Habitat:
Freshwater
Conservation status (2015):
Endangered (EN)
Occurrence and distribution
Questionable:
China
Introduced:
Bangladesh, Philippines, Singapore, Myanmar
Native:
Thailand, Vietnam, Laos, Cambodia
Not established:
Taiwan
Systematics
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae.
Refseq information: 7
SNo.
Status
RNA nucleotide accession
Protein accession
Genomic nucleotide accession
Start position on genomic DNA
End position on genomic DNA
Orientation
Assembly
Symbol
UniProtkb ID
1
MODEL
XM_026923246.2
XP_026779047.1
NC_047612.1
19335660
19355137 (19477)
-
Reference GENO_
pparaa
-
2
MODEL
XM_026923247.2
XP_026779048.1
NC_047612.1
19335660
19355137 (19477)
-
Reference GENO_
pparaa
-
3
MODEL
XM_026923248.2
XP_026779049.1
NC_047612.1
19335660
19355137 (19477)
-
Reference GENO_
pparaa
-
4
MODEL
XM_026923249.2
XP_026779050.1
NC_047612.1
19335660
19355137 (19477)
-
Reference GENO_
pparaa
-
5
MODEL
XM_026923250.2
XP_026779051.1
NC_047612.1
19335660
19355137 (19477)
-
Reference GENO_
pparaa
-
6
MODEL
XM_034313315.1
XP_034169206.1
NC_047612.1
19335660
19355137 (19477)
-
Reference GENO_
pparaa
-
7
MODEL
XM_034313316.1
XP_034169207.1
NC_047612.1
19335660
19355137 (19477)
-
Reference GENO_
pparaa
-
mRNA analysis
Promoter analysis of gene:
Primere design of mRNA:
Similarity search :
Analysis of homologous transcript:
Home
CABin
Support &Feedback
Copyright ©2016 NBFGR (ICAR), All Rights Reserved.