A database of hypoxia responsive genes in fishes
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Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
Similarity search
mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
About Database
Gene details for the gene E1A binding protein p300 (Gene Id: 113527092 Symbol: ep300)
Pangasianodon hypophthalmus
[Striped catfish]
Family:
Pangasiidae
Habitat:
Freshwater
Conservation status (2015):
Endangered (EN)
Occurrence and distribution
Questionable:
China
Introduced:
Bangladesh, Philippines, Singapore, Myanmar
Native:
Thailand, Vietnam, Laos, Cambodia
Not established:
Taiwan
Systematics
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae.
Refseq information: 7
SNo.
Status
RNA nucleotide accession
Protein accession
Genomic nucleotide accession
Start position on genomic DNA
End position on genomic DNA
Orientation
Assembly
Symbol
UniProtkb ID
1
MODEL
XM_026914597.2
XP_026770398.2
NC_047606.1
11291052
11314636 (23584)
+
Reference GENO_
ep300a
-
2
MODEL
XM_026914598.2
XP_026770399.2
NC_047606.1
11291052
11314636 (23584)
+
Reference GENO_
ep300a
-
3
MODEL
XM_026914599.2
XP_026770400.2
NC_047606.1
11291052
11314636 (23584)
+
Reference GENO_
ep300a
-
4
MODEL
XM_026914600.2
XP_026770401.2
NC_047606.1
11291052
11314636 (23584)
+
Reference GENO_
ep300a
-
5
MODEL
XM_026914601.2
XP_026770402.2
NC_047606.1
11291052
11314636 (23584)
+
Reference GENO_
ep300a
-
6
MODEL
XM_026914603.2
XP_026770404.2
NC_047606.1
11291052
11314636 (23584)
+
Reference GENO_
ep300a
-
7
MODEL
XM_026914604.2
XP_026770405.2
NC_047606.1
11291052
11314636 (23584)
+
Reference GENO_
ep300a
-
mRNA analysis
Promoter analysis of gene:
Primere design of mRNA:
Similarity search :
Analysis of homologous transcript:
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