A database of hypoxia responsive genes in fishes
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Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
Similarity search
mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
About Database
Gene details for the gene Hypoxia inducible factor 1 subunit alpha (Gene Id: 113011652 Symbol: hif1a)
Astatotilapia calliptera
[Eastern happy, Kolokoto ]
Family:
Cichlidae
Habitat:
Freshwater
Conservation status (2015):
Least Concern (LC)
Occurrence and distribution
Native:
Tanzania, Mozambique, Malawi, Zambia, Zimbabwe
Systematics
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex.
Refseq information: 2
SNo.
Status
RNA nucleotide accession
Protein accession
Genomic nucleotide accession
Start position on genomic DNA
End position on genomic DNA
Orientation
Assembly
Symbol
UniProtkb ID
1
MODEL
XM_026151266.1
XP_026007051.1
NC_039320.1
24276491
24290781 (14290)
-
Reference fAstC
hif1aa
-
2
MODEL
XM_026151267.1
XP_026007052.1
NC_039320.1
24276491
24290781 (14290)
-
Reference fAstC
hif1aa
-
mRNA analysis
Promoter analysis of gene:
Primere design of mRNA:
Similarity search :
Analysis of homologous transcript:
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