A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Hypoxia inducible factor 1 subunit alpha inhibitor (Gene Id: 111670027  Symbol: hif1an)

Seriola lalandi dorsalis     [Yellowtail amberjack, Yellowtail tuna]     Family:Carangidae    Habitat: -    Conservation status (2015): Least Concern (LC)
Occurrence and distribution -
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae.
Refseq information: 1
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_023426567.1 XP_023282335.1 NW_019525385.1 1593807 1602932  (9125) + Reference Sedor hif1an -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 31
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAis_active_nucleusComponent21873635
2Danio rerioIEAlocated_innucleusComponentNot available
3Danio rerioISScolocalizenucleusComponentNot available
4Danio rerioIBAis_active_cytoplasmComponent21873635
5Danio rerioIEAlocated_incytoplasmComponentNot available
6Danio rerioISSlocated_incytoplasmComponentNot available
7Danio rerioISSenablesferrous iron bindingFunctionNot available
8Danio rerioISSenableszinc ion bindingFunctionNot available
9Danio rerioIEAenablesoxidoreductase activityFunctionNot available
10Danio rerioIBAenables2-oxoglutarate-dependent dioxygenase activityFunction21873635
11Danio rerioIGIacts_upstrregulation of vascular endothelial growth factor receptor signaling pathwayProcess25347788
12Danio rerioISSenablescarboxylic acid bindingFunctionNot available
13Danio rerioIBAinvolved_ipeptidyl-histidine hydroxylationProcess21873635
14Danio rerioISSinvolved_ipeptidyl-histidine hydroxylationProcessNot available
15Danio rerioIBAenablespeptidyl-histidine dioxygenase activityFunction21873635
16Danio rerioISSenablespeptidyl-histidine dioxygenase activityFunctionNot available
17Danio rerioIBAenablespeptidyl-asparagine 3-dioxygenase activityFunction21873635
18Danio rerioISSenablespeptidyl-asparagine 3-dioxygenase activityFunctionNot available
19Danio rerioIBAinvolved_ipeptidyl-aspartic acid hydroxylationProcess21873635
20Danio rerioISSinvolved_ipeptidyl-aspartic acid hydroxylationProcessNot available
21Danio rerioIBAinvolved_ipeptidyl-asparagine hydroxylationProcess21873635
22Danio rerioISSinvolved_ipeptidyl-asparagine hydroxylationProcessNot available
23Danio rerioISSenablesprotein homodimerization activityFunctionNot available
24Danio rerioIBAinvolved_inegative regulation of Notch signaling pathwayProcess21873635
25Danio rerioIEAenablesmetal ion bindingFunctionNot available
26Danio rerioISSlocated_inperinuclear region of cytoplasmComponentNot available
27Danio rerioIEAenablesdioxygenase activityFunctionNot available
28Danio rerioIBAinvolved_inegative regulation of transcription from RNA polymerase II promoter in response to hypoxiaProcess21873635
29Danio rerioIBAenablesankyrin repeat bindingFunction21873635
30Danio rerioIDAacts_upstrnegative regulation of vasculature developmentProcess25347788
31Danio rerioIMPacts_upstrnegative regulation of vasculature developmentProcess25347788

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