A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Hypoxia inducible factor 1 subunit alpha inhibitor (Gene Id: 109100806  Symbol: hif1an)

Cyprinus carpio     [Common carp]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Vulnerable (VU)
Occurrence and distribution Introduced: India, Japan, Indonesia, Bangladesh, Malaysia, Sri Lanka, Pakistan, Philippines, Singapore, Thailand, Taiwan, South Korea, Vietnam, Israel, Iraq, Iran, Egypt, Myanmar, Jordan, Syria, Lebanon, Hong Kong, Laos, Cambodia, Brunei, Bhutan, Nepal, Afghanistan, Kyrgyzstan, Turkmenistan, Australia, New Zealand, Papua New Guinea, South Africa, Tanzania, Madagascar, Kenya, Morocco, Nigeria, Namibia, Cameroon, Mozambique, Ghana, Ivory Coast, UK, Germany, France, Spain, Portugal, Italy, Greece, Romania, Norway, Sweden, Denmark, Ireland, Finland, Belgium, Netherlands, USA, Mexico, Canada, Brazil, Argentina, Colombia, Peru, Venezuela, Chile, Uruguay, Suriname, Hawaii, Panama, Cuba, Puerto Rico, Costa Rica, Nicaragua, Haiti, Dominican Republic, Guatemala, Fiji, Guam, El Salvador, Albania, Belarus, Bosnia and Herzegovina, Croatia, Cyprus, Estonia, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Montenegro, Poland, Slovenia, Switzerland, Botswana, Central African Republic, Ethiopia, Lesotho, Mauritius, Reunion, Rwanda, Swaziland, Togo, Tunisia, Uganda, Zimbabwe
Native: China, Mongolia, Kazakhstan, Uzbekistan, Turkey, Russia, Bulgaria, Ukraine, Georgia, Azerbaijan, Austria, Czech Republic, Hungary, Macedonia, Moldova, Serbia, Slovakia
Not established: Algeria, Sudan, Jamaica, Honduras, Malawi, Zambia
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 3
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_042769072.1 XP_042625006.1 NC_056584.1 17355162 17362030  (6868) - Reference ASM18 LOC109100806 -
2 MODEL XM_042769073.1 XP_042625007.1 NC_056584.1 17355162 17362030  (6868) - Reference ASM18 LOC109100806 -
3 MODEL XM_042769074.1 XP_042625008.1 NC_056584.1 17355162 17362030  (6868) - Reference ASM18 LOC109100806 -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 31
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAis_active_nucleusComponent21873635
2Danio rerioIEAlocated_innucleusComponentNot available
3Danio rerioISScolocalizenucleusComponentNot available
4Danio rerioIBAis_active_cytoplasmComponent21873635
5Danio rerioIEAlocated_incytoplasmComponentNot available
6Danio rerioISSlocated_incytoplasmComponentNot available
7Danio rerioISSenablesferrous iron bindingFunctionNot available
8Danio rerioISSenableszinc ion bindingFunctionNot available
9Danio rerioIEAenablesoxidoreductase activityFunctionNot available
10Danio rerioIBAenables2-oxoglutarate-dependent dioxygenase activityFunction21873635
11Danio rerioIGIacts_upstrregulation of vascular endothelial growth factor receptor signaling pathwayProcess25347788
12Danio rerioISSenablescarboxylic acid bindingFunctionNot available
13Danio rerioIBAinvolved_ipeptidyl-histidine hydroxylationProcess21873635
14Danio rerioISSinvolved_ipeptidyl-histidine hydroxylationProcessNot available
15Danio rerioIBAenablespeptidyl-histidine dioxygenase activityFunction21873635
16Danio rerioISSenablespeptidyl-histidine dioxygenase activityFunctionNot available
17Danio rerioIBAenablespeptidyl-asparagine 3-dioxygenase activityFunction21873635
18Danio rerioISSenablespeptidyl-asparagine 3-dioxygenase activityFunctionNot available
19Danio rerioIBAinvolved_ipeptidyl-aspartic acid hydroxylationProcess21873635
20Danio rerioISSinvolved_ipeptidyl-aspartic acid hydroxylationProcessNot available
21Danio rerioIBAinvolved_ipeptidyl-asparagine hydroxylationProcess21873635
22Danio rerioISSinvolved_ipeptidyl-asparagine hydroxylationProcessNot available
23Danio rerioISSenablesprotein homodimerization activityFunctionNot available
24Danio rerioIBAinvolved_inegative regulation of Notch signaling pathwayProcess21873635
25Danio rerioIEAenablesmetal ion bindingFunctionNot available
26Danio rerioISSlocated_inperinuclear region of cytoplasmComponentNot available
27Danio rerioIEAenablesdioxygenase activityFunctionNot available
28Danio rerioIBAinvolved_inegative regulation of transcription from RNA polymerase II promoter in response to hypoxiaProcess21873635
29Danio rerioIBAenablesankyrin repeat bindingFunction21873635
30Danio rerioIDAacts_upstrnegative regulation of vasculature developmentProcess25347788
31Danio rerioIMPacts_upstrnegative regulation of vasculature developmentProcess25347788

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