Cyprinodon variegatus     [Sheepshead minnow]     Family:Cyprinodontidae    Habitat: Saltwater and freshwater    Conservation status (2015): Not Reported Occurrence and distribution Native: USA, Mexico, Colombia, Venezuela, Guyana, Suriname, French Guiana, Cuba, Jamaica, Puerto Rico, Haiti, Dominican Republic, Anguilla, Antigua and Barbuda, Aruba, Bahamas, Barbados, Cayman Islands, Curaçao Island, Grenada, Guadeloupe, Martinique, Montserrat, Saint Kitts and Nevis, Saint Lucia, Saint Vincent and the Grenadines, Trinidad and Tobago, Turks and Caicos Islands Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae.

Refseq information: 1 SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID 1 MODEL XM_015390442.1 XP_015245928.1 NW_015150454.1 1960576 1971810  (11234) + Reference C_var hif1an -

mRNA analysis Promoter analysis of gene: Primere design of mRNA: Similarity search : Analysis of homologous transcript:

GO Term: 31 SNo. Reported in speceis Evidence Qualifier GO term Category PubMed Link 1 Danio rerio IBA is_active_ nucleus Component 21873635 2 Danio rerio IEA located_in nucleus Component Not available 3 Danio rerio ISS colocalize nucleus Component Not available 4 Danio rerio IBA is_active_ cytoplasm Component 21873635 5 Danio rerio IEA located_in cytoplasm Component Not available 6 Danio rerio ISS located_in cytoplasm Component Not available 7 Danio rerio ISS enables ferrous iron binding Function Not available 8 Danio rerio ISS enables zinc ion binding Function Not available 9 Danio rerio IEA enables oxidoreductase activity Function Not available 10 Danio rerio IBA enables 2-oxoglutarate-dependent dioxygenase activity Function 21873635 11 Danio rerio IGI acts_upstr regulation of vascular endothelial growth factor receptor signaling pathway Process 25347788 12 Danio rerio ISS enables carboxylic acid binding Function Not available 13 Danio rerio IBA involved_i peptidyl-histidine hydroxylation Process 21873635 14 Danio rerio ISS involved_i peptidyl-histidine hydroxylation Process Not available 15 Danio rerio IBA enables peptidyl-histidine dioxygenase activity Function 21873635 16 Danio rerio ISS enables peptidyl-histidine dioxygenase activity Function Not available 17 Danio rerio IBA enables peptidyl-asparagine 3-dioxygenase activity Function 21873635 18 Danio rerio ISS enables peptidyl-asparagine 3-dioxygenase activity Function Not available 19 Danio rerio IBA involved_i peptidyl-aspartic acid hydroxylation Process 21873635 20 Danio rerio ISS involved_i peptidyl-aspartic acid hydroxylation Process Not available 21 Danio rerio IBA involved_i peptidyl-asparagine hydroxylation Process 21873635 22 Danio rerio ISS involved_i peptidyl-asparagine hydroxylation Process Not available 23 Danio rerio ISS enables protein homodimerization activity Function Not available 24 Danio rerio IBA involved_i negative regulation of Notch signaling pathway Process 21873635 25 Danio rerio IEA enables metal ion binding Function Not available 26 Danio rerio ISS located_in perinuclear region of cytoplasm Component Not available 27 Danio rerio IEA enables dioxygenase activity Function Not available 28 Danio rerio IBA involved_i negative regulation of transcription from RNA polymerase II promoter in response to hypoxia Process 21873635 29 Danio rerio IBA enables ankyrin repeat binding Function 21873635 30 Danio rerio IDA acts_upstr negative regulation of vasculature development Process 25347788 31 Danio rerio IMP acts_upstr negative regulation of vasculature development Process 25347788