A database of hypoxia responsive genes in fishes
 
  Gene details for the gene BCL2 interacting protein 3 (Gene Id: 107093570  Symbol: bnip3)

Cyprinodon variegatus     [Sheepshead minnow]     Family:Cyprinodontidae    Habitat: Saltwater and freshwater    Conservation status (2015): Not Reported
Occurrence and distribution Native: USA, Mexico, Colombia, Venezuela, Guyana, Suriname, French Guiana, Cuba, Jamaica, Puerto Rico, Haiti, Dominican Republic, Anguilla, Antigua and Barbuda, Aruba, Bahamas, Barbados, Cayman Islands, Curaçao Island, Grenada, Guadeloupe, Martinique, Montserrat, Saint Kitts and Nevis, Saint Lucia, Saint Vincent and the Grenadines, Trinidad and Tobago, Turks and Caicos Islands
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae.
Refseq information: 1
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_015388711.1 XP_015244197.1 NW_015150886.1 65252 70452  (5200) + Reference C_var bnip4 -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 12
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAis_active_nucleusComponent21873635
2Danio rerioIBAis_active_nuclear envelopeComponent21873635
3Danio rerioIEAlocated_inmitochondrionComponentNot available
4Danio rerioIEAlocated_inmitochondrial envelopeComponentNot available
5Danio rerioIBAis_active_mitochondrial outer membraneComponent21873635
6Danio rerioIBAis_active_endoplasmic reticulumComponent21873635
7Danio rerioIEAlocated_inmembraneComponentNot available
8Danio rerioIEAlocated_inintegral component of membraneComponentNot available
9Danio rerioIEAacts_upstrpositive regulation of apoptotic processProcessNot available
10Danio rerioIBAinvolved_iregulation of programmed cell deathProcess21873635
11Danio rerioIBAinvolved_ipositive regulation of programmed cell deathProcess21873635
12Danio rerioIBAinvolved_imitochondrial outer membrane permeabilizationProcess21873635

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