A database of hypoxia responsive genes in fishes
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Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
Similarity search
mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
About Database
Gene details for the gene Caspase-3 (Gene Id: 105918367 Symbol: LOC105918367)
Fundulus heteroclitus
[Mummichog]
Family:
Fundulidae
Habitat:
Saltwater and freshwater
Conservation status (2015):
Least Concern (LC)
Occurrence and distribution
Introduced:
Philippines, Spain, Portugal, Hawaii
Native:
USA, Canada
Systematics
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae.
Refseq information: 4
SNo.
Status
RNA nucleotide accession
Protein accession
Genomic nucleotide accession
Start position on genomic DNA
End position on genomic DNA
Orientation
Assembly
Symbol
UniProtkb ID
1
MODEL
XM_012853438.3
XP_012708892.2
NC_046383.1
35057549
35075282 (17733)
+
Reference MU-UC
LOC105918367
A0A146NTR7
2
MODEL
XM_021311069.2
XP_021166744.2
NC_046383.1
35057549
35075282 (17733)
+
Reference MU-UC
LOC105918367
A0A146NTR7
3
MODEL
XM_021311070.2
XP_021166745.2
NC_046383.1
35057549
35075282 (17733)
+
Reference MU-UC
LOC105918367
A0A146NTR7
4
MODEL
XM_021311072.2
XP_021166747.2
NC_046383.1
35057549
35075282 (17733)
+
Reference MU-UC
LOC105918367
A0A146NTR7
mRNA analysis
Promoter analysis of gene:
Primere design of mRNA:
Similarity search :
Analysis of homologous transcript:
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