A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Hypoxia inducible factor 1 subunit alpha inhibitor (Gene Id: 103476845  Symbol: hif1an)

Poecilia reticulata     [Guppy, Barbados millions ]     Family:Poeciliidae    Habitat: Freshwater    Conservation status (2015): Not Reported
Occurrence and distribution Introduced: India, Japan, Indonesia, Malaysia, Sri Lanka, Philippines, Singapore, Thailand, Taiwan, Vietnam, Saudi Arabia, UAE, Hong Kong, Russia, Australia, New Zealand, Papua New Guinea, South Africa, Madagascar, Kenya, Nigeria, Namibia, UK, Spain, Italy, Romania, Netherlands, USA, Mexico, Colombia, Peru, Hawaii, Cuba, Jamaica, Puerto Rico, Costa Rica, Fiji, French Polynesia, Guam, New Caledonia, Samoa, Vanuatu, Guadeloupe, Martinique, Virgin Islands (USA), Albania, Czech Republic, Hungary, Slovakia, Comoros, Mauritius, Mayotte, Reunion, Seychelles, Uganda, Zambia
Not established: Canada
Native: Brazil, Venezuela, Guyana, Antigua and Barbuda, Barbados, Trinidad and Tobago
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Girardinus; Dactylophallus.
Refseq information: 1
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_008429504.2 XP_008427726.1 NC_024345.1 15309249 15318986  (9737) + Reference Guppy hif1an -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 31
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAis_active_nucleusComponent21873635
2Danio rerioIEAlocated_innucleusComponentNot available
3Danio rerioISScolocalizenucleusComponentNot available
4Danio rerioIBAis_active_cytoplasmComponent21873635
5Danio rerioIEAlocated_incytoplasmComponentNot available
6Danio rerioISSlocated_incytoplasmComponentNot available
7Danio rerioISSenablesferrous iron bindingFunctionNot available
8Danio rerioISSenableszinc ion bindingFunctionNot available
9Danio rerioIEAenablesoxidoreductase activityFunctionNot available
10Danio rerioIBAenables2-oxoglutarate-dependent dioxygenase activityFunction21873635
11Danio rerioIGIacts_upstrregulation of vascular endothelial growth factor receptor signaling pathwayProcess25347788
12Danio rerioISSenablescarboxylic acid bindingFunctionNot available
13Danio rerioIBAinvolved_ipeptidyl-histidine hydroxylationProcess21873635
14Danio rerioISSinvolved_ipeptidyl-histidine hydroxylationProcessNot available
15Danio rerioIBAenablespeptidyl-histidine dioxygenase activityFunction21873635
16Danio rerioISSenablespeptidyl-histidine dioxygenase activityFunctionNot available
17Danio rerioIBAenablespeptidyl-asparagine 3-dioxygenase activityFunction21873635
18Danio rerioISSenablespeptidyl-asparagine 3-dioxygenase activityFunctionNot available
19Danio rerioIBAinvolved_ipeptidyl-aspartic acid hydroxylationProcess21873635
20Danio rerioISSinvolved_ipeptidyl-aspartic acid hydroxylationProcessNot available
21Danio rerioIBAinvolved_ipeptidyl-asparagine hydroxylationProcess21873635
22Danio rerioISSinvolved_ipeptidyl-asparagine hydroxylationProcessNot available
23Danio rerioISSenablesprotein homodimerization activityFunctionNot available
24Danio rerioIBAinvolved_inegative regulation of Notch signaling pathwayProcess21873635
25Danio rerioIEAenablesmetal ion bindingFunctionNot available
26Danio rerioISSlocated_inperinuclear region of cytoplasmComponentNot available
27Danio rerioIEAenablesdioxygenase activityFunctionNot available
28Danio rerioIBAinvolved_inegative regulation of transcription from RNA polymerase II promoter in response to hypoxiaProcess21873635
29Danio rerioIBAenablesankyrin repeat bindingFunction21873635
30Danio rerioIDAacts_upstrnegative regulation of vasculature developmentProcess25347788
31Danio rerioIMPacts_upstrnegative regulation of vasculature developmentProcess25347788

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