Stegastes partitus [Bicolor damselfish] Family:Pomacentridae Habitat: Saltwater Conservation status (2015): Not Reported |
Occurrence and distribution |
Native: USA, Mexico, Brazil, Venezuela, Cuba, Jamaica, Puerto Rico, Haiti, Dominican Republic, Honduras, Anguilla, Antigua and Barbuda, Aruba, Bahamas, Barbados, Belize, Bermuda, British Virgin Islands, Cayman Islands, Curaçao Island, Grenada, Guadeloupe, Martinique, Montserrat, Saint Kitts and Nevis, Saint Lucia, Saint Vincent and the Grenadines, Trinidad and Tobago, Turks and Caicos Islands, Virgin Islands (USA)
|
Systematics | Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae. |
|
|
Refseq information: 1
SNo. |
Status |
RNA nucleotide accession |
Protein accession |
Genomic nucleotide accession |
Start position on genomic DNA |
End position on genomic DNA |
Orientation |
Assembly |
Symbol |
UniProtkb ID |
1 |
MODEL |
XM_008278827.1 |
XP_008277049.1 |
NW_007577864.1 |
530650 |
539588 (8938) |
+ |
Reference Stega |
hif1an |
- |
|
|
mRNA analysis |
Promoter analysis of gene: |
|
Primere design of mRNA: |
|
Similarity search : |
|
Analysis of homologous transcript: |
|
|
|
|
GO Term: 31 |
SNo. | Reported in speceis | Evidence | Qualifier | GO term | Category |
PubMed Link |
1 | Danio rerio | IBA | is_active_ | nucleus | Component | 21873635 | 2 | Danio rerio | IEA | located_in | nucleus | Component | Not available | 3 | Danio rerio | ISS | colocalize | nucleus | Component | Not available | 4 | Danio rerio | IBA | is_active_ | cytoplasm | Component | 21873635 | 5 | Danio rerio | IEA | located_in | cytoplasm | Component | Not available | 6 | Danio rerio | ISS | located_in | cytoplasm | Component | Not available | 7 | Danio rerio | ISS | enables | ferrous iron binding | Function | Not available | 8 | Danio rerio | ISS | enables | zinc ion binding | Function | Not available | 9 | Danio rerio | IEA | enables | oxidoreductase activity | Function | Not available | 10 | Danio rerio | IBA | enables | 2-oxoglutarate-dependent dioxygenase activity | Function | 21873635 | 11 | Danio rerio | IGI | acts_upstr | regulation of vascular endothelial growth factor receptor signaling pathway | Process | 25347788 | 12 | Danio rerio | ISS | enables | carboxylic acid binding | Function | Not available | 13 | Danio rerio | IBA | involved_i | peptidyl-histidine hydroxylation | Process | 21873635 | 14 | Danio rerio | ISS | involved_i | peptidyl-histidine hydroxylation | Process | Not available | 15 | Danio rerio | IBA | enables | peptidyl-histidine dioxygenase activity | Function | 21873635 | 16 | Danio rerio | ISS | enables | peptidyl-histidine dioxygenase activity | Function | Not available | 17 | Danio rerio | IBA | enables | peptidyl-asparagine 3-dioxygenase activity | Function | 21873635 | 18 | Danio rerio | ISS | enables | peptidyl-asparagine 3-dioxygenase activity | Function | Not available | 19 | Danio rerio | IBA | involved_i | peptidyl-aspartic acid hydroxylation | Process | 21873635 | 20 | Danio rerio | ISS | involved_i | peptidyl-aspartic acid hydroxylation | Process | Not available | 21 | Danio rerio | IBA | involved_i | peptidyl-asparagine hydroxylation | Process | 21873635 | 22 | Danio rerio | ISS | involved_i | peptidyl-asparagine hydroxylation | Process | Not available | 23 | Danio rerio | ISS | enables | protein homodimerization activity | Function | Not available | 24 | Danio rerio | IBA | involved_i | negative regulation of Notch signaling pathway | Process | 21873635 | 25 | Danio rerio | IEA | enables | metal ion binding | Function | Not available | 26 | Danio rerio | ISS | located_in | perinuclear region of cytoplasm | Component | Not available | 27 | Danio rerio | IEA | enables | dioxygenase activity | Function | Not available | 28 | Danio rerio | IBA | involved_i | negative regulation of transcription from RNA polymerase II promoter in response to hypoxia | Process | 21873635 | 29 | Danio rerio | IBA | enables | ankyrin repeat binding | Function | 21873635 | 30 | Danio rerio | IDA | acts_upstr | negative regulation of vasculature development | Process | 25347788 | 31 | Danio rerio | IMP | acts_upstr | negative regulation of vasculature development | Process | 25347788 |
|