A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Notch receptor 2 (Gene Id: 102352392  Symbol: NOTCH2)

Latimeria chalumnae     [Coelacanth]     Family:Coelacanthidae    Habitat: Saltwater    Conservation status (2015): Critically Endangered (CR)
Occurrence and distribution Questionable: China
Native: Indonesia, South Africa, Tanzania, Madagascar, Kenya, Mozambique, Comoros
SystematicsEukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Coelacanthimorpha; Coelacanthiformes; Coelacanthidae.
Refseq information: 1
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_005994070.2 XP_005994132.1 NW_005819204.1 1150596 1333094  (182498) + Reference LatCh NOTCH2 M3XH63
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 23
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIGIacts_upstrliver developmentProcess15509774
2Danio rerioIMPacts_upstrvasculature developmentProcess25230933
3Danio rerioIMPacts_upstrlymphangiogenesisProcess20466977
4Danio rerioIBAenablesNotch bindingFunction21873635
5Danio rerioIEAenablescalcium ion bindingFunctionNot available
6Danio rerioIEAlocated_innucleusComponentNot available
7Danio rerioIEAlocated_inplasma membraneComponentNot available
8Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
9Danio rerioIBAinvolved_iNotch signaling pathwayProcess21873635
10Danio rerioIEAacts_upstrNotch signaling pathwayProcessNot available
11Danio rerioIEAacts_upstrmulticellular organism developmentProcessNot available
12Danio rerioIEAlocated_inmembraneComponentNot available
13Danio rerioIEAlocated_inintegral component of membraneComponentNot available
14Danio rerioIEAacts_upstrcell differentiationProcessNot available
15Danio rerioIMPacts_upstrendocrine pancreas developmentProcess26963759
16Danio rerioIEAenablessignaling receptor activityFunctionNot available
17Danio rerioIEPacts_upstrtissue regenerationProcess16205622
18Danio rerioIMPacts_upstrglucose homeostasisProcess26963759
19Danio rerioIEAenablesmetal ion bindingFunctionNot available
20Danio rerioIEAacts_upstrregulation of developmental processProcessNot available
21Danio rerioIGIacts_upstrface morphogenesisProcess20431122
22Danio rerioIGIacts_upstrcartilage development involved in endochondral bone morphogenesisProcess20431122
23Danio rerioIMPacts_upstrpancreas regenerationProcess26963759

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