A database of hypoxia responsive genes in fishes
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Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
Similarity search
mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
About Database
Gene details for the gene Hypoxia inducible factor 1 subunit alpha (Gene Id: 102348279 Symbol: HIF1A)
Latimeria chalumnae
[Coelacanth]
Family:
Coelacanthidae
Habitat:
Saltwater
Conservation status (2015):
Critically Endangered (CR)
Occurrence and distribution
Questionable:
China
Native:
Indonesia, South Africa, Tanzania, Madagascar, Kenya, Mozambique, Comoros
Systematics
Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Coelacanthimorpha; Coelacanthiformes; Coelacanthidae.
Refseq information: 3
SNo.
Status
RNA nucleotide accession
Protein accession
Genomic nucleotide accession
Start position on genomic DNA
End position on genomic DNA
Orientation
Assembly
Symbol
UniProtkb ID
1
MODEL
XM_005986412.2
XP_005986474.1
NW_005819013.1
2963987
3015118 (51131)
-
Reference LatCh
HIF1AA
H3BFX9
2
MODEL
XM_014485378.1
XP_014340864.1
NW_005819013.1
2963987
3015118 (51131)
-
Reference LatCh
HIF1AA
H3BFX9
3
MODEL
XM_014485379.1
XP_014340865.1
NW_005819013.1
2963987
3015118 (51131)
-
Reference LatCh
HIF1AA
H3BFX9
mRNA analysis
Promoter analysis of gene:
Primere design of mRNA:
Similarity search :
Analysis of homologous transcript:
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