A database of hypoxia responsive genes in fishes
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Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
Similarity search
mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
About Database
Gene details for the gene Peroxisome proliferator activated receptor alpha (Gene Id: 102307159 Symbol: ppara)
Haplochromis burtoni
Family:
Cichlidae
Habitat:
Freshwater
Conservation status (2015):
Least Concern (LC)
Occurrence and distribution
Native:
Tanzania, Kenya, Uganda
Systematics
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex.
Refseq information: 5
SNo.
Status
RNA nucleotide accession
Protein accession
Genomic nucleotide accession
Start position on genomic DNA
End position on genomic DNA
Orientation
Assembly
Symbol
UniProtkb ID
1
MODEL
XM_005915662.3
XP_005915724.1
NW_024582375.1
2086038
2095732 (9694)
-
Reference NCSU_
pparaa
-
2
MODEL
XM_005915663.3
XP_005915725.1
NW_024582375.1
2086038
2095732 (9694)
-
Reference NCSU_
pparaa
-
3
MODEL
XM_005915664.2
XP_005915726.1
NW_024582375.1
2086038
2095732 (9694)
-
Reference NCSU_
pparaa
-
4
MODEL
XM_005915665.3
XP_005915727.1
NW_024582375.1
2086038
2095732 (9694)
-
Reference NCSU_
pparaa
-
5
MODEL
XM_042217715.1
XP_042073649.1
NW_024582375.1
2086038
2095732 (9694)
-
Reference NCSU_
pparaa
-
mRNA analysis
Promoter analysis of gene:
Primere design of mRNA:
Similarity search :
Analysis of homologous transcript:
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