A database of hypoxia responsive genes in fishes
 
  Gene details for the gene CREB regulated transcription coactivator 3 (Gene Id: 101061280  Symbol: crtc3)

Takifugu rubripes     [Japanese pufferfish]     Family:Tetraodontidae    Habitat: Saltwater and freshwater    Conservation status (2015): Not Reported
Occurrence and distribution Native: China, Japan, Taiwan, South Korea, North Korea, Russia
Questionable: Philippines
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae.
Refseq information: 6
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_011609827.2 XP_011608129.1 NC_042297.1 11815052 11832555  (17503) + Reference fTakR crtc3 -
2 MODEL XM_011609828.2 XP_011608130.1 NC_042297.1 11815052 11832555  (17503) + Reference fTakR crtc3 -
3 MODEL XM_011609830.2 XP_011608132.1 NC_042297.1 11815052 11832555  (17503) + Reference fTakR crtc3 -
4 MODEL XM_011609831.2 XP_011608133.1 NC_042297.1 11815052 11832555  (17503) + Reference fTakR crtc3 -
5 MODEL XM_029845901.1 XP_029701761.1 NC_042297.1 11815052 11832555  (17503) + Reference fTakR crtc3 -
6 MODEL XM_029845902.1 XP_029701762.1 NC_042297.1 11815052 11832555  (17503) + Reference fTakR crtc3 -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 11
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIMPacts_upstrresponse to hypoxiaProcess25840431
2Danio rerioIBAis_active_nucleusComponent21873635
3Danio rerioIEAlocated_innucleusComponentNot available
4Danio rerioIBAis_active_cytoplasmComponent21873635
5Danio rerioIEAlocated_incytoplasmComponentNot available
6Danio rerioIBAenablescAMP response element binding protein bindingFunction21873635
7Danio rerioIEAenablescAMP response element binding protein bindingFunctionNot available
8Danio rerioIBAinvolved_ipositive regulation of CREB transcription factor activityProcess21873635
9Danio rerioIEAacts_upstrpositive regulation of CREB transcription factor activityProcessNot available
10Danio rerioIBAinvolved_ipositive regulation of transcription by RNA polymerase IIProcess21873635
11Danio rerioIEAacts_upstrprotein homotetramerizationProcessNot available

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