A database of hypoxia responsive genes in fishes
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Hypoxia responsive genes collection in fishes
The hypoxia responsive genes reported in fishes have been collected from the published research articles.
S.No.
species name
Family
Commonm name
Habitat
Total genes in HRGFish
1
Acanthochromis polyacanthus
Pomacentridae
Spiny chromis
Saltwater
26
2
Amphiprion ocellaris
Pomacentridae
Clown anemonefish
Saltwater
21
3
Anabas testudineus
Anabantidae
Climbing perch
Freshwater
29
4
Astatotilapia calliptera
Cichlidae
Eastern happy
Freshwater
28
5
Astyanax mexicanus
Characidae
Mexican tetra
Freshwater
44
6
Austrofundulus limnaeus
Rivulidae
-
Freshwater
34
7
Boleophthalmus pectinirostris
Gobiidae
Great blue spotted mudskipper
Saltwater
20
8
Callorhinchus milii
Callorhinchidae
Ghost shark
Saltwater
26
9
Carassius auratus
Cyprinidae
Goldfish
Freshwater
16
10
Clupea harengus
Clupeidae
Atlantic herring
Saltwater
38
11
Cynoglossus semilaevis
Cynoglossidae
Tongue sole
Saltwater and freshwater
39
12
Cyprinodon variegatus
Cyprinodontidae
Sheepshead minnow
Saltwater and freshwater
34
13
Cyprinus carpio
Cyprinidae
Common carp
Freshwater
19
14
Danio rerio
Cyprinidae
Zebra danio
Freshwater
50
15
Electrophorus electricus
Gymnotidae
Electric eel
Freshwater
33
16
Esox lucius
Esocidae
Northern pike
Freshwater
40
17
Fundulus heteroclitus
Fundulidae
Mummichog
Saltwater and freshwater
38
18
Gasterosteus aculeatus
Gasterosteidae
Three-spined stickleback
Saltwater and freshwater
1
19
Gouania willdenowi
Gobiesocidae
Blunt-snouted clingfish
Saltwater
31
20
Haplochromis burtoni
Cichlidae
-
Freshwater
32
21
Hippocampus comes
Syngnathidae
Tiger tail seahorse
Saltwater
28
22
Ictalurus punctatus
Ictaluridae
Channel catfish
Freshwater
39
23
Kryptolebias marmoratus
Rivulidae
Mangrove rivulus
Freshwater
37
24
Labrus bergylta
Labridae
Ballan wrasse
Saltwater
30
25
Larimichthys crocea
Sciaenidae
Large yellow croaker
Saltwater and freshwater
36
26
Lates calcarifer
Latidae
Barramundi
Saltwater
31
27
Latimeria chalumnae
Coelacanthidae
Coelacanth
Saltwater
34
28
Lepisosteus oculatus
Lepisosteidae
Spotted gar
Freshwater
38
29
Mastacembelus armatus
Mastacembelidae
Zig-zag eel
Freshwater
31
30
Maylandia zebra
Cichlidae
Zebra mbuna
freshwater
40
31
Monopterus albus
Synbranchidae
Asian swamp eel
Freshwater
32
32
Neolamprologus brichardi
Cichlidae
-
Freshwater
10
33
Nothobranchius furzeri
Nothobranchiidae
Turquoise killifish
Freshwater
32
34
Notothenia coriiceps
Nototheniidae
Black rockcod
Saltwater
27
35
Oncorhynchus kisutch
Salmonidae
Coho salmon
Saltwater and freshwater
13
36
Oncorhynchus mykiss
Salmonidae
Rainbow trout
Freshwater
27
37
Oncorhynchus tshawytscha
Salmonidae
Chinook salmon
Saltwater and freshwater
16
38
Oreochromis niloticus
Cichlidae
Nile tilapia
Freshwater
39
39
Oryzias latipes
Adrianichthyidae
Japanese rice fish
Freshwater
41
40
Oryzias melastigma
Adrianichthyidae
-
Freshwater
27
41
Pangasianodon hypophthalmus
Pangasiidae
Striped catfish
Freshwater
30
42
Paralichthys olivaceus
Paralichthyidae
Bastard halibut
Saltwater
25
43
Parambassis ranga
Ambassidae
Indian glassy fish
Freshwater
26
44
Paramormyrops kingsleyae
Mormyridae
-
Freshwater
26
45
Perca flavescens
Percidae
American yellow perch
Freshwater
1
46
Poecilia formosa
Poeciliidae
Amazon molly
Freshwater
38
47
Poecilia latipinna
Poeciliidae
Sailfin molly
Freshwater
27
48
Poecilia mexicana
Poeciliidae
Shortfin molly
Freshwater
33
49
Poecilia reticulata
Poeciliidae
Guppy
Freshwater
36
50
Pundamilia nyererei
Cichlidae
-
Freshwater
35
51
Pygocentrus nattereri
Serrasalmidae
Red piranha
Freshwater
31
52
Rhincodon typus
Rhincodontidae
Whale shark
Saltwater
4
53
Salmo salar
Salmonidae
Atlantic salmon
Freshwater
40
54
Salvelinus alpinus
Salmonidae
Arctic char
-
19
55
Scleropages formosus
Osteoglossidae
Asian bonytongue
Freshwater
30
56
Seriola dumerili
Carangidae
Greater amberjack
Saltwater
28
57
Seriola lalandi dorsalis
Carangidae
Yellowtail amberjack
-
24
58
Sinocyclocheilus anshuiensis
Cyprinidae
-
Freshwater
20
59
Sinocyclocheilus grahami
Cyprinidae
Golden-line barbel
Freshwater
26
60
Sinocyclocheilus rhinocerous
Cyprinidae
-
Freshwater
19
61
Stegastes partitus
Pomacentridae
Bicolor damselfish
Saltwater
32
62
Tachysurus fulvidraco
Bagridae
Yellow catfish
Freshwater
32
63
Takifugu rubripes
Tetraodontidae
Japanese pufferfish
Saltwater and freshwater
35
64
Xiphophorus couchianus
Poeciliidae
Monterrey platyfish
Freshwater
28
65
Xiphophorus maculatus
Poeciliidae
Southern platyfish
Freshwater
39
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