A database of hypoxia responsive genes in fishes
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Hypoxia responsive genes collection in fishes
The hypoxia responsive genes reported in fishes have been collected from the published research articles.
S.No.
species name
Family
Commonm name
Habitat
Total genes in HRGFish
1
Acanthochromis polyacanthus
Pomacentridae
Spiny chromis
Saltwater
53
2
Acanthopagrus latus
Sparidae
Yellowfin seabream
Saltwater
18
3
Acipenser ruthenus
Acipenseridae
Sterlet sturgeon
Freshwater
29
4
Alosa sapidissima
Clupeidae
American shad
Saltwater and freshwater
13
5
Amblyraja radiata
Rajidae
Starry ray
Saltwater
20
6
Amphiprion ocellaris
Pomacentridae
Clown anemonefish
Saltwater
40
7
Anabas testudineus
Anabantidae
Climbing perch
Freshwater
41
8
Anarrhichthys ocellatus
Anarhichadidae
Wolf-eel
Saltwater
27
9
Anguilla anguilla
Anguillidae
European eel
Saltwater and freshwater
25
10
Archocentrus centrarchus
Cichlidae
Flier cichlid
Freshwater
23
11
Astatotilapia calliptera
Cichlidae
Eastern happy
Freshwater
45
12
Astyanax mexicanus
Characidae
Mexican tetra
Freshwater
65
13
Austrofundulus limnaeus
Rivulidae
-
Freshwater
55
14
Betta splendens
Osphronemidae
Siamese fighting fish
Freshwater
23
15
Boleophthalmus pectinirostris
Gobiidae
Great blue spotted mudskipper
Saltwater
41
16
Callorhinchus milii
Callorhinchidae
Ghost shark
Saltwater
44
17
Carassius auratus
Cyprinidae
Goldfish
Freshwater
51
18
Carcharodon carcharias
Lamnidae
Great white shark
Saltwater
14
19
Chanos chanos
Chanidae
Milkfish
Saltwater and freshwater
28
20
Cheilinus undulatus
Labridae
Humphead wrasse
Saltwater
12
21
Chelmon rostratus
Chaetodontidae
Copperband butterflyfish
Saltwater
13
22
Clupea harengus
Clupeidae
Atlantic herring
Saltwater
56
23
Colossoma macropomum
Serrasalmidae
Cachama
Freshwater
23
24
Coregonus clupeaformis
Salmonidae
Lake whitefish
Freshwater
24
25
Cottoperca gobio
Bovichtidae
Channel bull blenny
Saltwater
22
26
Cyclopterus lumpus
Cyclopteridae
Lumpfish
Saltwater
20
27
Cynoglossus semilaevis
Cynoglossidae
Tongue sole
Saltwater and freshwater
61
28
Cyprinodon tularosa
Cyprinodontidae
White Sands pupfish
Freshwater
21
29
Cyprinodon variegatus
Cyprinodontidae
Sheepshead minnow
Saltwater and freshwater
55
30
Cyprinus carpio
Cyprinidae
Common carp
Freshwater
44
31
Danio rerio
Cyprinidae
Zebra danio
Freshwater
69
32
Denticeps clupeoides
Denticipitidae
Denticle herring
Freshwater
24
33
Echeneis naucrates
Echeneidae
Live sharksucker
Saltwater
24
34
Electrophorus electricus
Gymnotidae
Electric eel
Freshwater
51
35
Epinephelus lanceolatus
Serranidae
Giant grouper
Saltwater
20
36
Erpetoichthys calabaricus
Polypteridae
Reedfish
Freshwater
23
37
Esox lucius
Esocidae
Northern pike
Freshwater
57
38
Etheostoma cragini
Percidae
Arkansas darter
Freshwater
19
39
Etheostoma spectabile
Percidae
Orangethroat darter
Freshwater
22
40
Fundulus heteroclitus
Fundulidae
Mummichog
Saltwater and freshwater
66
41
Gadus morhua
Gadidae
Atlantic cod
Saltwater
18
42
Gasterosteus aculeatus
Gasterosteidae
Three-spined stickleback
Saltwater and freshwater
16
43
Gouania willdenowi
Gobiesocidae
Blunt-snouted clingfish
Saltwater
51
44
Gymnodraco acuticeps
-
-
-
20
45
Haplochromis burtoni
Cichlidae
-
Freshwater
51
46
Hippocampus comes
Syngnathidae
Tiger tail seahorse
Saltwater
50
47
Hippoglossus hippoglossus
Pleuronectidae
Atlantic halibut
Saltwater
17
48
Hippoglossus stenolepis
Pleuronectidae
Pacific halibut
Saltwater
22
49
Ictalurus punctatus
Ictaluridae
Channel catfish
Freshwater
52
50
Kryptolebias marmoratus
Rivulidae
Mangrove rivulus
Freshwater
50
51
Labrus bergylta
Labridae
Ballan wrasse
Saltwater
48
52
Larimichthys crocea
Sciaenidae
Large yellow croaker
Saltwater and freshwater
52
53
Lates calcarifer
Latidae
Barramundi
Saltwater
44
54
Latimeria chalumnae
Coelacanthidae
Coelacanth
Saltwater
48
55
Lepisosteus oculatus
Lepisosteidae
Spotted gar
Freshwater
53
56
Mastacembelus armatus
Mastacembelidae
Zig-zag eel
Freshwater
50
57
Maylandia zebra
Cichlidae
Zebra mbuna
freshwater
62
58
Megalops cyprinoides
Megalopidae
Indo-Pacific tarpon
Saltwater and freshwater
26
59
Melanotaenia boesemani
Melanotaeniidae
Boeseman's rainbowfish
Freshwater
14
60
Micropterus salmoides
Centrarchidae
Largemouth black bass
Freshwater
23
61
Monopterus albus
Synbranchidae
Asian swamp eel
Freshwater
53
62
Morone saxatilis
Moronidae
Striped bass
Saltwater
21
63
Myripristis murdjan
Holocentridae
Pinecone soldierfish
Saltwater
24
64
Nematolebias whitei
Rivulidae
Rio pearlfish
Freshwater
21
65
Neolamprologus brichardi
Cichlidae
-
Freshwater
32
66
Nothobranchius furzeri
Nothobranchiidae
Turquoise killifish
Freshwater
51
67
Notolabrus celidotus
Labridae
Spotty
Saltwater
14
68
Notothenia coriiceps
Nototheniidae
Black rockcod
Saltwater
51
69
Oncorhynchus keta
Salmonidae
Chum salmon
Freshwater
32
70
Oncorhynchus kisutch
Salmonidae
Coho salmon
Saltwater and freshwater
49
71
Oncorhynchus mykiss
Salmonidae
Rainbow trout
Freshwater
62
72
Oncorhynchus nerka
Salmonidae
Sockeye salmon
Saltwater
36
73
Oncorhynchus tshawytscha
Salmonidae
Chinook salmon
Saltwater and freshwater
45
74
Oreochromis aureus
Cichlidae
Blue tilapia
Freshwater
21
75
Oreochromis niloticus
Cichlidae
Nile tilapia
Freshwater
63
76
Oryzias latipes
Adrianichthyidae
Japanese rice fish
Freshwater
58
77
Oryzias melastigma
Adrianichthyidae
-
Freshwater
46
78
Pangasianodon hypophthalmus
Pangasiidae
Striped catfish
Freshwater
49
79
Paralichthys olivaceus
Paralichthyidae
Bastard halibut
Saltwater
44
80
Parambassis ranga
Ambassidae
Indian glassy fish
Freshwater
51
81
Paramormyrops kingsleyae
Mormyridae
-
Freshwater
40
82
Perca flavescens
Percidae
American yellow perch
Freshwater
25
83
Perca fluviatilis
Percidae
European perch
Freshwater
21
84
Periophthalmus magnuspinnatus
Gobiidae
-
Saltwater
19
85
Petromyzon marinus
Petromyzontidae
Sea lamprey
Saltwater
17
86
Pimephales promelas
Cyprinidae
Fathead minnow
Freshwater
21
87
Plectropomus leopardus
Serranidae
Leopard coralgrouper
Saltwater
20
88
Poecilia formosa
Poeciliidae
Amazon molly
Freshwater
62
89
Poecilia latipinna
Poeciliidae
Sailfin molly
Freshwater
53
90
Poecilia mexicana
Poeciliidae
Shortfin molly
Freshwater
59
91
Poecilia reticulata
Poeciliidae
Guppy
Freshwater
56
92
Polyodon spathula
Polyodontidae
Mississippi paddlefish
Freshwater
18
93
Polypterus senegalus
Polypteridae
Gray bichir
Freshwater
13
94
Pseudochaenichthys georgianus
-
-
-
18
95
Pundamilia nyererei
Cichlidae
-
Freshwater
58
96
Pungitius pungitius
Gasterosteidae
Ninespine stickleback
Freshwater
18
97
Puntigrus tetrazona
Cyprinidae
Sumatra barb
Freshwater
14
98
Pygocentrus nattereri
Serrasalmidae
Red piranha
Freshwater
44
99
Rhincodon typus
Rhincodontidae
Whale shark
Saltwater
23
100
Salarias fasciatus
Blenniidae
Jewelled blenny
Saltwater
25
101
Salmo salar
Salmonidae
Atlantic salmon
Freshwater
86
102
Salmo trutta
Salmonidae
Sea trout
Freshwater
39
103
Salvelinus alpinus
Salmonidae
Arctic char
-
49
104
Salvelinus namaycush
Salmonidae
Lake trout
Freshwater
35
105
Sander lucioperca
Percidae
Pike-perch
Freshwater
23
106
Scleropages formosus
Osteoglossidae
Asian bonytongue
Freshwater
46
107
Scophthalmus maximus
Scophthalmidae
Turbot
Saltwater
20
108
Scyliorhinus canicula
Scyliorhinidae
Small-spotted catshark
Saltwater
17
109
Sebastes umbrosus
Sebastidae
Honeycomb rockfish
Saltwater
20
110
Seriola dumerili
Carangidae
Greater amberjack
Saltwater
50
111
Seriola lalandi dorsalis
Carangidae
Yellowtail amberjack
-
53
112
Simochromis diagramma
Cichlidae
-
Freshwater
18
113
Sinocyclocheilus anshuiensis
Cyprinidae
-
Freshwater
48
114
Sinocyclocheilus grahami
Cyprinidae
Golden-line barbel
Freshwater
55
115
Sinocyclocheilus rhinocerous
Cyprinidae
-
Freshwater
46
116
Sparus aurata
Sparidae
Gilthead seabream
Saltwater
26
117
Sphaeramia orbicularis
Apogonidae
Orbiculate cardinalfish
Saltwater
23
118
Stegastes partitus
Pomacentridae
Bicolor damselfish
Saltwater
56
119
Syngnathus acus
Syngnathidae
Greater pipefish
Saltwater
20
120
Tachysurus fulvidraco
Bagridae
Yellow catfish
Freshwater
45
121
Takifugu rubripes
Tetraodontidae
Japanese pufferfish
Saltwater and freshwater
52
122
Thalassophryne amazonica
Batrachoididae
-
Freshwater
23
123
Thunnus maccoyii
Scombridae
Southern bluefin tuna
Saltwater
14
124
Toxotes jaculatrix
Toxotidae
Banded archerfish
Freshwater
18
125
Trematomus bernacchii
-
-
-
25
126
Xiphias gladius
Xiphiidae
Swordfish
Saltwater
18
127
Xiphophorus couchianus
Poeciliidae
Monterrey platyfish
Freshwater
44
128
Xiphophorus hellerii
Poeciliidae
Green swordtail
Freshwater
24
129
Xiphophorus maculatus
Poeciliidae
Southern platyfish
Freshwater
57
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