Fish and Shellfish Microsatellite Database
 
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  Top 10 FishMicrosat Families  
Family Species
Cyprinidae 39
Serranidae15
Scombridae 11
Pomacentridae 9
Salmonidae9
Cichlidae 9
Bagridae8
Lutjanidae8
Poeciliidae7
Gobiidae6
 
  Top 10 FishMicrosat Species  
Species Records
Cyprinus carpio42000
Lates calcarifer3681
Ctenopharyngodon idella3363
Oncorhynchus mykiss2674
Hypophthalmichthys molitrix1365
Carassius auratus717
Hypophthalmichthys nobilis640
Labeo rohita637
Penaeus monodon618
Pagrus major597
  Primer design

Repeats information
SpeciesRepeatsRepeats regionSequence lengthAccession no.
Labeo fimbriatus(AG)69(TG)11407..5661002 bpKF356498

Sequence
GGGATCAAATCTGTCTGTAGGAGCGCTAAAGAGCCTGCAGCCGCATTCGTCTGTGTCACAGAGGAGGAGGAGAAAGGGAC
GAATGATTAGAGGAACTCAAACACACGCGCACGCACACACACACACACACACACACGCACACGTAGAATTCATGGGTGTG
GAAATGCAGCACAGAGCGAGTCTGCGACTGAGTCAAAGCCGGAGCTACGGGCCAAAATAGAAGCAAGTTGACATGGACGT
ACGTCTAAGAGAGCAGTTAGTGAGACTAACATGCCGAGCTAATGACATCACGCAGGGGAGGGGCCTAGACAGTGACATCA
GAGGCATCGAAAATAGACACAGGGACAGGAAGTGATGCAACGGACAGGAAACACAGTGAGTGCAGAGCTGGACAGACACA
CTGGCCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTG
TGTGTGACTGACCCTGGCGGCAGCGGTTCTGGCCTGGGTGGGGGCGGCTGCTGTCGTGTTTTTCCTCCATCAGGCGCACA
CGGGCTAGAGCTGGCCGCCACGGCCTTCTGTGTTCTCACACCCACACATGAGAAAGAGGAGGGTGGTGGTTATCTCGCTC
CCTCCCCCCCTCTCTCTCGATATGAGTATCTCTCGCTCTATATCTCTCCCGCGCCCGCTTTCTCTTTATCTCCCGCACAC
TACATCTCACAACCCTCGCCGTTTACTGACAAACACACTCGGGTTAAATGATCCCAAGCTTCCCGGGTACCGCAATCACT
TGTGAGTGCGCGCCCGCGTGGGGGTCAACCATAGAGGAGAGCCCCCATCGTGTTTAATGTATATCTTATATATTCTATAG
TGCACCAAAAAAAAACATAGCGTAAGCATGGGTTATATCTGT

Primers information
Warning: Length of flanking regions are not enough to design primer sequences for slected locus.
 
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