Rashid Iliyas, Pathak Ajey Kumar, Kumar Ravindra, Srivastava Prachi, Singh Mahender, S. Murali, Kushwaha Basdeo. (2019). Genome-Wide Comparative Analysis of HIF Binding Sites in Cyprinus Carpio for In Silico Identification of Functional Hypoxia Response Elements.Front. Genet. 10:659. doi: 10.3389/fgene.2019.00659
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Rashid Iliyas, Baisvar Vishwamitra Singh, Singh Mahender, Srivastava Prachi, Kumar Ravindra, Kushwaha Basdeo, Pathak Ajey Kumar. (2019). Isolation and characterization of hypoxia inducible gene connective tissue growth factor (CTGF) in Labeo rohita. Mol Biol Rep. https://doi.org/10.1007/s11033-019-04617-w
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Pathak Ajey Kumar, Rashid Iliyas, Kumar Ravindra, Pati Rameshwar, Singh Mahender, Murali S, Kushwaha Basdeo, Kumar Dinesh, Rai Anil. (2019). FisOmics: A portal of fish genomic resources. Genomics. pii: S0888-7543(18)30207-6.
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Rashid Iliyas, Nagpure Naresh Sahebrao, Srivastava Prachi, Kumar Ravindra, Pathak Ajey Kumar, Vishwamitra Singh Baisvar, Singh Mahender, Kushwaha Basdeo. (2017). HREFinder: A Tool for Quarrying Hypoxia-Response Element in Genomic Sequence. Int. J. Curr. Microbiol. App. Sci 6(7): 1580-1586
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Rashid Iliyas, Nagpure Naresh Sahebrao, Srivastava Prachi, Kumar Ravindra, Pathak Ajey Kumar, Singh Mahender, Kushwaha Basdeo (2017). HRGFish: A database of hypoxia responsive genes in fishes. Sci. Rep. 7, 42346; doi: 10.1038/srep42346.
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Nagpure Naresh Sahebrao, Pathak Ajey Kumar, Pati Rameshwar, Rashid Iliyas, Sharma Joyti, Singh Shri Prakash, Singh Mahender, Sarkar Uttam Kumar, Kushwaha Basdeo, Kumar Ravindra, Murali S. (2016). Fish Karyome version 2.1: a chromosome database of fishes and other aquatic organisms. Database,1-8. doi:10.1093/database/baw012.
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Nagpure Naresh Sahebrao, Rashid Iliyas, Pathak Ajey Kumar, Singh Mahender, Pati Rameshwar, Singh Shri Prakash and Sarkar Uttam Kumar (2015). FMiR: A Curated Resource of Mitochondrial DNA Information for Fish. PloSONE, 10(8):e0136711, doi: 10.1371/journal.pone.0136711.
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Nagpure Naresh Sahebrao, Rashid Iliyas, Pathak Ajey Kumar, Singh Mahender, Singh Shri Prakash and Sarkar Uttam Kumar (2015). In Silico analysis of SSRs in Mitochondrial genomes of fishes. Mitochondrial DNA, 26(2):195-20.
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Nagpure Naresh Sahebrao, Rashid Iliyas, Pati Rameshwar, Pathak Ajey Kumar, Singh Mahender, Singh Shri Prakash and Sarkar Uttam Kumar (2013). FishMicrosat: a microsatellite database of commercially important fishes and shellfishes of the Indian subcontinent. BMC Genomics, 14:630.
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Verma Arunima Kumar, Gupta Shipra, Verma Sharad, Mishra Abha, Nagpure Naresh Sahebrao, Singh Shivesh Pratap, Pathak Ajey Kumar, Sarkar Uttam Kumar, Singh Shri Prakash, Singh Mahender, Seth Prahlad Kishore (2012).Interaction between shrimp and white spot syndrome virus through PmRab7-VP28 complex: an insight using simulation and docking studies. Journal of Molecular Modeling. 19(3):1285-94.
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Nagpure Naresh Sahebrao, Rashid Iliyas, Pathak Ajey Kumar, Singh Mahender, Singh Shri Prakash, Sarkar Uttam Kumar (2012). Computational analysis of transcriptome of Indian major carp, Labeo rohita (Hamilton-Buchanan, 1822) for functional annotation. Bioinformation, 8(21):1005-1011.
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Nagpure Naresh Sahebrao, Rashid Iliyas, Pathak Ajey Kumar, Singh Mahender, Singh Shri Prakash, Sarkar Uttam Kumar (2012). FBIS: A DNA Barcode Information System for Indian Fishes. Bioinformation, 8(10):483-488.
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Nagpure Naresh Sahebrao, Pathak Ajey Kumar, Pati Rameshwar, Singh Shri Prakash, Singh Mahender, Sarkar Uttam Kumar, Kushwaha Basdeo, Kumar Ravindra (2012). Fish Karyome: A Karyological Information Network database of Indian Fishes. Bioinformation, 8(9):440-444.
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अजय कुमार पाठक, अंशुल तिवारी, एन एस नागपुरे, इलियास राशिद, रामेश्वर पति. मछलियों मे अजैविक तनाव, खेती, भा०कृ०अनुप० पत्रिका, २०१५, ६७(८), १७-१९.

Nagpure Naresh Sahebrao, Verma Arunima Kumar, Singh Shri Prakash, Sarkar Uttam Kumar (2012) Trends in Fish Genomics. In: Applied Computational biology and Statistics in Biotechnology and Bioinformatics Vol.1. Ajit K Roy (ed.), New India Publishing Agency, New Delhi pp. 195-210.

Nagpure Naresh Sahebrao, Verma Arunima Kumar, Singh Shri Prakash, Pathak Ajey Kumar, Sarkar Uttam Kumar, Singh Mahender (2013) Protein Structure Prediction: Methodology and Resources. In: Advances In Applied Information and Knowledge Management Practices in Knowledge Era. Ajit K Roy (ed), New India Publishing Agency, New Delhi, Chapter 17, pp. 229-239.