A resource on hypoxia responsive genes in fish
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Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
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mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
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Multiple sequence alignment and anlysis
Query:
Gene symbol fth1b(447823) ferritin, heavy polypeptide 1b of species
Danio rerio
Species
Acanthochromis polyacanthus
Amphiprion ocellaris
Anabas testudineus
Astatotilapia calliptera
Astyanax mexicanus
Austrofundulus limnaeus
Boleophthalmus pectinirostris
Callorhinchus milii
Carassius auratus
Clupea harengus
Cynoglossus semilaevis
Cyprinodon variegatus
Cyprinus carpio
Danio rerio
Electrophorus electricus
Esox lucius
Fundulus heteroclitus
Gasterosteus aculeatus
Gouania willdenowi
Haplochromis burtoni
Hippocampus comes
Ictalurus punctatus
Kryptolebias marmoratus
Labrus bergylta
Larimichthys crocea
Lates calcarifer
Latimeria chalumnae
Lepisosteus oculatus
Mastacembelus armatus
Maylandia zebra
Monopterus albus
Neolamprologus brichardi
Nothobranchius furzeri
Notothenia coriiceps
Oncorhynchus kisutch
Oncorhynchus mykiss
Oncorhynchus tshawytscha
Oreochromis niloticus
Oryzias latipes
Oryzias melastigma
Pangasianodon hypophthalmus
Paralichthys olivaceus
Parambassis ranga
Paramormyrops kingsleyae
Perca flavescens
Poecilia formosa
Poecilia latipinna
Poecilia mexicana
Poecilia reticulata
Pundamilia nyererei
Pygocentrus nattereri
Rhincodon typus
Salmo salar
Salvelinus alpinus
Scleropages formosus
Seriola dumerili
Seriola lalandi dorsalis
Sinocyclocheilus anshuiensis
Sinocyclocheilus grahami
Sinocyclocheilus rhinocerous
Stegastes partitus
Tachysurus fulvidraco
Takifugu rubripes
Xiphophorus couchianus
Xiphophorus maculatus
Gene list:
erythropoietin a
erythropoietin b
cellular communication network factor 2a
cellular communication network factor 2b
ceruloplasmin
solute carrier family 2 member 1a
solute carrier family 2 member 2
solute carrier family 2 member 3a
insulin-like growth factor binding protein 1a
insulin-like growth factor binding protein 2a
insulin-like growth factor binding protein 2b
insulin-like growth factor binding protein 3
myoglobin
vascular endothelial growth factor Aa
vascular endothelial growth factor c
hypoxia inducible factor 1 subunit alpha a
hypoxia inducible factor 1 subunit alpha b
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1
peroxisome proliferator-activated receptor alpha a
peroxisome proliferator-activated receptor alpha b
ferritin, heavy polypeptide 1a
ferritin, heavy polypeptide 1b
transferrin-a
heme oxygenase 1a
heme oxygenase 2a
heme oxygenase 2b
hemopexin a
CREB binding protein
CREB binding protein a
CREB binding protein b
CREB regulated transcription coactivator 3
endothelial PAS domain protein 1a
endothelial PAS domain protein 1b
fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor recep
calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 2
notch receptor 2
fibrillarin
aldolase a, fructose-bisphosphate, a
lactate dehydrogenase Ba
enolase 1a, (alpha)
BCL2 interacting protein 3
caspase 3, apoptosis-related cysteine peptidase a
cadherin 5
egl-9 family hypoxia-inducible factor 3
insulin receptor substrate 2b
ATP-binding cassette, sub-family G (WHITE), member 4a
aryl-hydrocarbon receptor nuclear translocator 2
hypoxia inducible factor 1 subunit alpha inhibitor
mitogen-activated protein kinase 1
transferrin receptor 1a
Output:
CLUSTAL
PHYLIP
Distance method:
Uncorrected
Jukes-Cantor
Kimura
Tamura
Tajima-Nei
Jin-Nei Gamma
Maximum length:
300
350
400
450
500
550
600
Distance method: Kimura(2)
Alignment ---------------
Tree .DND ---------------
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