A resource on hypoxia responsive genes in fish
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Multiple sequence alignment and anlysis
Query:
Gene symbol arnt2(103462320) aryl hydrocarbon receptor nuclear translocator 2 of species
Poecilia reticulata
Species
Acanthochromis polyacanthus
Amphiprion ocellaris
Anabas testudineus
Astatotilapia calliptera
Astyanax mexicanus
Austrofundulus limnaeus
Boleophthalmus pectinirostris
Callorhinchus milii
Carassius auratus
Clupea harengus
Cynoglossus semilaevis
Cyprinodon variegatus
Cyprinus carpio
Danio rerio
Electrophorus electricus
Esox lucius
Fundulus heteroclitus
Gasterosteus aculeatus
Gouania willdenowi
Haplochromis burtoni
Hippocampus comes
Ictalurus punctatus
Kryptolebias marmoratus
Labrus bergylta
Larimichthys crocea
Lates calcarifer
Latimeria chalumnae
Lepisosteus oculatus
Mastacembelus armatus
Maylandia zebra
Monopterus albus
Neolamprologus brichardi
Nothobranchius furzeri
Notothenia coriiceps
Oncorhynchus kisutch
Oncorhynchus mykiss
Oncorhynchus tshawytscha
Oreochromis niloticus
Oryzias latipes
Oryzias melastigma
Pangasianodon hypophthalmus
Paralichthys olivaceus
Parambassis ranga
Paramormyrops kingsleyae
Perca flavescens
Poecilia formosa
Poecilia latipinna
Poecilia mexicana
Poecilia reticulata
Pundamilia nyererei
Pygocentrus nattereri
Rhincodon typus
Salmo salar
Salvelinus alpinus
Scleropages formosus
Seriola dumerili
Seriola lalandi dorsalis
Sinocyclocheilus anshuiensis
Sinocyclocheilus grahami
Sinocyclocheilus rhinocerous
Stegastes partitus
Tachysurus fulvidraco
Takifugu rubripes
Xiphophorus couchianus
Xiphophorus maculatus
Gene list:
erythropoietin
cellular communication network factor 2
ceruloplasmin-like
solute carrier family 2 member 2
solute carrier family 2 member 4
insulin-like growth factor-binding protein 1
insulin like growth factor binding protein 2
insulin like growth factor binding protein 3
myoglobin
vascular endothelial growth factor A
vascular endothelial growth factor B
vascular endothelial growth factor C
hypoxia inducible factor 1 subunit alpha
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1
peroxisome proliferator activated receptor alpha
ferritin, heavy subunit
ferritin, heavy subunit
heme oxygenase 2-like
heme oxygenase 2-like
hemopexin
CREB binding protein
endothelial PAS domain protein 1
fms related tyrosine kinase 1
fibrillarin
lactate dehydrogenase B
enolase 1
BCL2 interacting protein 3
egl-9 family hypoxia inducible factor 3
insulin receptor substrate 2
ATP binding cassette subfamily G member 4
aryl hydrocarbon receptor nuclear translocator 2
hypoxia inducible factor 1 subunit alpha inhibitor
mitogen-activated protein kinase 1
caspase-3
CREB-regulated transcription coactivator 3-like
titin
Output:
CLUSTAL
PHYLIP
Distance method:
Uncorrected
Jukes-Cantor
Kimura
Tamura
Tajima-Nei
Jin-Nei Gamma
Maximum length:
300
350
400
450
500
550
600
Distance method: Kimura(2)
Alignment ---------------
Tree .DND ---------------
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