Danio rerio [Zebra danio, Zebrafish, Anju] Family:Cyprinidae Habitat: Freshwater Conservation status (2015): Least Concern (LC) |
Occurrence and distribution |
Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
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Systematics | Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia. |
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Refseq information: 1
SNo. |
Status |
RNA nucleotide accession |
Protein accession |
Genomic nucleotide accession |
Start position on genomic DNA |
End position on genomic DNA |
Orientation |
Assembly |
Symbol |
UniProtkb ID |
1 |
PROVISIONAL |
NM_001308559.1 |
NP_001295488.1 |
NC_007124.7 |
31757330 |
31783585 (26255) |
+ |
Reference GRCz1 |
hif1aa |
F1QNB9 |
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mRNA analysis |
Promoter analysis of gene: |
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Primere design of mRNA: |
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Similarity search : |
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Analysis of homologous transcript: |
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PubMed links |
19449054 21555741 21873635 22665266 23341543 23461336 24367256 24613281 25205386 25866969 26454018 26469318 26908177 27189481 27222589 27264935 27499207 28077310 28285553 28524872 28851829 29035725 29339404 30126845 30327615 30518608 30685453 31314708 31372513 31820205 32446740 32485057 32673542 32984302 33057104
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GO Term: 13 |
SNo. | Reported in speceis | Evidence | Qualifier | GO term | Category |
PubMed Link |
1 | Danio rerio | IBA | enables | RNA polymerase II transcription regulatory region sequence-specific DNA binding | Function | 21873635 | 2 | Danio rerio | IBA | enables | DNA-binding transcription factor activity, RNA polymerase II-specific | Function | 21873635 | 3 | Danio rerio | IEA | located_in | nucleus | Component | Not available | 4 | Danio rerio | IEA | acts_upstr | regulation of transcription, DNA-templated | Process | Not available | 5 | Danio rerio | IBA | involved_i | regulation of transcription by RNA polymerase II | Process | 21873635 | 6 | Danio rerio | IGI | acts_upstr | Notch signaling pathway | Process | 29339404 | 7 | Danio rerio | IMP | acts_upstr | Notch signaling pathway | Process | 29339404 | 8 | Danio rerio | IGI | acts_upstr | regulation of angiogenesis | Process | 28524872 | 9 | Danio rerio | IEA | enables | protein dimerization activity | Function | Not available | 10 | Danio rerio | IGI | acts_upstr | hematopoietic stem cell differentiation | Process | 29339404 | 11 | Danio rerio | IMP | acts_upstr | hematopoietic stem cell differentiation | Process | 29339404 | 12 | Danio rerio | IBA | involved_i | cellular response to hypoxia | Process | 21873635 | 13 | Danio rerio | IGI | acts_upstr | macrophage migration | Process | 28524872 |
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