A database of hypoxia responsive genes in fishes
  Gene details for the gene Endothelial PAS domain protein 1a (Gene Id: 566886  Symbol: epas1a)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 3
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_005156297.4 XP_005156354.1 NC_007123.7 25775755 25827163  (51408) + Reference GRCz1 epas1a F8W2W5
2 MODEL XM_009306741.3 XP_009305016.1 NC_007123.7 25775755 25827163  (51408) + Reference GRCz1 epas1a F8W2W5
3 MODEL XM_690170.9 XP_695262.6 NC_007123.7 25775755 25827163  (51408) + Reference GRCz1 epas1a F8W2W5
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
19449054 21873635 23461336 24196071 24613281 24683187 25205386 25866969 26469318 27189481 27222589 28285553 29339404 30126845
 
GO Term: 10
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBA-DNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
2Danio rerioIEA-DNA-binding transcription factor activityFunctionNot available
3Danio rerioIBA-nucleusComponent21873635
4Danio rerioIEA-nucleusComponentNot available
5Danio rerioIEA-transcription factor complexComponentNot available
6Danio rerioIEA-cytoplasmComponentNot available
7Danio rerioIEA-regulation of transcription, DNA-templatedProcessNot available
8Danio rerioIBA-regulation of transcription by RNA polymerase IIProcess21873635
9Danio rerioIBA-positive regulation of transcription by RNA polymerase IIProcess21873635
10Danio rerioIEA-protein dimerization activityFunctionNot available

Home  CABin  Support &Feedback

Copyright ©2016 ICAR-NBFGR, All Rights Reserved.

<