Danio rerio [Zebra danio, Zebrafish, Anju] Family:Cyprinidae Habitat: Freshwater Conservation status (2015): Least Concern (LC) |
Occurrence and distribution |
Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
|
Systematics | Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia. |
|
|
Refseq information: 1
SNo. |
Status |
RNA nucleotide accession |
Protein accession |
Genomic nucleotide accession |
Start position on genomic DNA |
End position on genomic DNA |
Orientation |
Assembly |
Symbol |
UniProtkb ID |
1 |
PROVISIONAL |
NM_213002.1 |
NP_998167.1 |
NC_007127.7 |
42177658 |
42186078 (8420) |
- |
Reference GRCz1 |
fbl |
Q7ZTZ4 |
|
|
mRNA analysis |
Promoter analysis of gene: |
|
Primere design of mRNA: |
|
Similarity search : |
|
Analysis of homologous transcript: |
|
|
|
PubMed links |
12477932 15256591 16109975 16322560 17623065 21214862 21873635 23357851 24198278 26469318 27189481 29477341
|
|
GO Term: 17 |
SNo. | Reported in speceis | Evidence | Qualifier | GO term | Category |
PubMed Link |
1 | Danio rerio | IBA | involved_i | box C/D RNA 3'-end processing | Process | 21873635 | 2 | Danio rerio | IBA | enables | RNA binding | Function | 21873635 | 3 | Danio rerio | IEA | enables | RNA binding | Function | Not available | 4 | Danio rerio | IBA | is_active_ | nucleolus | Component | 21873635 | 5 | Danio rerio | IDA | located_in | nucleolus | Component | 23357851 | 6 | Danio rerio | IEA | acts_upstr | rRNA processing | Process | Not available | 7 | Danio rerio | IEA | enables | methyltransferase activity | Function | Not available | 8 | Danio rerio | IBA | enables | rRNA methyltransferase activity | Function | 21873635 | 9 | Danio rerio | IBA | is_active_ | Cajal body | Component | 21873635 | 10 | Danio rerio | IEA | enables | transferase activity | Function | Not available | 11 | Danio rerio | IMP | acts_upstr | neurogenesis | Process | 29477341 | 12 | Danio rerio | IBA | involved_i | rRNA methylation | Process | 21873635 | 13 | Danio rerio | IBA | part_of | box C/D RNP complex | Component | 21873635 | 14 | Danio rerio | IBA | part_of | small-subunit processome | Component | 21873635 | 15 | Danio rerio | IEA | acts_upstr | methylation | Process | Not available | 16 | Danio rerio | IBA | involved_i | histone glutamine methylation | Process | 21873635 | 17 | Danio rerio | IBA | enables | histone-glutamine methyltransferase activity | Function | 21873635 |
|