Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC) Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.

Refseq information: 2 SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID 1 SUPPRESSED NM_200233.1 - - 0 0  (0) ? - hif1ab Q6EHI4 2 VALIDATED NM_001310042.1 NP_001296971.1 NC_007131.7 20326610 20355576  (28966) - Reference GRCz1 hif1ab Q6EHI4

mRNA analysis Promoter analysis of gene: Primere design of mRNA: Similarity search : Analysis of homologous transcript:

PubMed links

12207891 12477932 15520368 16428465 16997637 17656667 18186356 18977541 19123687 19198653 19449054 20085798 20571107 20694827 20952382 21343420 21555741 21873635 21931746 22511881 22665266 22684503 23034716 23151342 23326562 23341543 23392835 23421720 23454196 23461336 23712262 23831555 24055561 24247081 24367256 24568569 24574340 24613281 24613356 24642059 24850928 24967596 25000307 25117453 25205386 25347788 25603810 25730270 25771346 25866969 26034287 26052946 26265472 26469318 26681691 26908177 26933814 27189481 27222589 27264782 27264935 27549025 27562099 27578788 27751871 27802147 27802896 27974833 28077310 28285553 28524872 28602865 28624236 28634424 28851829 29036334 29329032 29339404 29494911 29672321 30031069 30102439 30126845 30327615 30552162 30711760 30944477 31070548 31349543 31372513 31518677 31539803 31677554 31820205 31997350 32485057 32673542 33057104

GO Term: 28 SNo. Reported in speceis Evidence Qualifier GO term Category PubMed Link 1 Danio rerio IDA enables transcription cis-regulatory region binding Function 27222589 2 Danio rerio IBA enables RNA polymerase II transcription regulatory region sequence-specific DNA binding Function 21873635 3 Danio rerio IBA enables DNA-binding transcription factor activity, RNA polymerase II-specific Function 21873635 4 Danio rerio IEP acts_upstr response to hypoxia Process 21343420 5 Danio rerio IMP acts_upstr response to hypoxia Process 27802147 6 Danio rerio IGI acts_upstr neural crest cell migration Process 30031069 7 Danio rerio IMP acts_upstr neural crest cell migration Process 23712262 8 Danio rerio IMP acts_upstr neural crest cell migration Process 30031069 9 Danio rerio IDA enables chromatin binding Function 23421720 10 Danio rerio IEA enables DNA-binding transcription factor activity Function Not available 11 Danio rerio IEA located_in nucleus Component Not available 12 Danio rerio IEA located_in cytoplasm Component Not available 13 Danio rerio IDA acts_upstr regulation of transcription, DNA-templated Process 24613356 14 Danio rerio IEA acts_upstr regulation of transcription, DNA-templated Process Not available 15 Danio rerio IBA involved_i regulation of transcription by RNA polymerase II Process 21873635 16 Danio rerio IGI acts_upstr Notch signaling pathway Process 29339404 17 Danio rerio IMP acts_upstr Notch signaling pathway Process 29339404 18 Danio rerio IGI acts_upstr motor neuron axon guidance Process 26681691 19 Danio rerio IMP acts_upstr motor neuron axon guidance Process 26681691 20 Danio rerio IMP acts_upstr response to glucose Process 23341543 21 Danio rerio IGI acts_upstr regulation of angiogenesis Process 28524872 22 Danio rerio IMP acts_upstr negative regulation of transcription, DNA-templated Process 26681691 23 Danio rerio IEA enables protein dimerization activity Function Not available 24 Danio rerio IGI acts_upstr neuron apoptotic process Process 19123687 25 Danio rerio IGI acts_upstr hematopoietic stem cell differentiation Process 27751871 26 Danio rerio IMP acts_upstr hematopoietic stem cell differentiation Process 27751871 27 Danio rerio IBA involved_i cellular response to hypoxia Process 21873635 28 Danio rerio IGI acts_upstr macrophage migration Process 28524872