A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Cellular communication network factor 2a (Gene Id: 321449  Symbol: ccn2a)

Danio rerio     [Zebra danio, Zebrafish, Anju]     Family:Cyprinidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: India, Bangladesh, Pakistan, Myanmar, Bhutan, Nepal
Introduced: Japan, Sri Lanka, Philippines, USA, Colombia, Martinique
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Salmophasia.
Refseq information: 2
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 PROVISIONAL NM_001015041.2 NP_001015041.1 NC_007131.7 25340813 25343489  (2676) + Reference GRCz1 ccn2a Q5RI33
2 PROVISIONAL NM_001015041.2 NP_001015041.1 NW_018395073.1 210212 212888  (2676) + Reference GRCz1 ccn2a Q5RI33
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
PubMed links
11116087 12477932 14718378 15677724 16950203 17997003 18455719 20503371 21116857 21873635 21887364 22729936 23499292 24130815 24247081 24416389 24873830 25313964 25617839 26190107 26209644 26209646 26719149 26967905 27122168 27149851 27378925 27428308 27581547 27811277 27935819 27993976 28369143 28466843 28602865 28654864 28692648 28705894 29283341 29302617 29406519 29522173 29529391 30133415 30295714 30348863 30418535 30475205 30530669 30742093 31042481 31267430 31269749 32032546 32570707 32843528 33163496 33234717 33377648
 
GO Term: 14
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAenablesintegrin bindingFunction21873635
2Danio rerioIEAenablesinsulin-like growth factor bindingFunctionNot available
3Danio rerioIEAlocated_inextracellular regionComponentNot available
4Danio rerioIBAinvolved_icell adhesionProcess21873635
5Danio rerioIBAinvolved_isignal transductionProcess21873635
6Danio rerioIEAacts_upstrsignal transductionProcessNot available
7Danio rerioIMPacts_upstrendoderm developmentProcess25313964
8Danio rerioIBAenablesheparin bindingFunction21873635
9Danio rerioIMPacts_upstrnotochord developmentProcess16950203
10Danio rerioIBAis_active_extracellular matrixComponent21873635
11Danio rerioIMPacts_upstrregenerationProcess27811277
12Danio rerioIMPacts_upstrchordate embryonic developmentProcess16950203
13Danio rerioIMPacts_upstrdefinitive hemopoiesisProcess31042481
14Danio rerioIBAinvolved_inegative regulation of cell deathProcess21873635

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