A database of hypoxia responsive genes in fishes
 
  Gene details for the gene BCL2 interacting protein 3 (Gene Id: 109935590  Symbol: bnip3)

Rhincodon typus     [Whale shark]     Family:Rhincodontidae    Habitat: Saltwater    Conservation status (2015): Vulnerable (VU)
Occurrence and distribution Native: India, China, Japan, Indonesia, Bangladesh, Malaysia, Sri Lanka, Pakistan, Philippines, Singapore, Thailand, Taiwan, South Korea, North Korea, Maldives, Vietnam, Saudi Arabia, Israel, Iraq, Iran, Egypt, Myanmar, Bahrain, Jordan, Kuwait, Oman, Qatar, UAE, Yemen, Hong Kong, Cambodia, Macau, Brunei, Australia, Papua New Guinea, South Africa, Tanzania, Madagascar, Angola, Somalia, Kenya, Morocco, Nigeria, Namibia, Cameroon, Mozambique, Ghana, Mauritania, Sudan, Ivory Coast, Eritrea, Liberia, Senegal, Guinea, Sierra Leone, USA, Mexico, American Soma, Brazil, Argentina, Colombia, Peru, Venezuela, Chile, Ecuador, Uruguay, Guyana, Suriname, French Guiana, Hawaii, Panama, Cuba, Jamaica, Puerto Rico, Costa Rica, Nicaragua, Haiti, Dominican Republic, Guatemala, Honduras, Fiji, French Polynesia, Guam, Kiribati, Marshall Islands, Micronesia, New Caledonia, Samoa, Solomon Islands, Tonga, Vanuatu, Anguilla, Antigua and Barbuda, Aruba, Bahamas, Barbados, Belize, Bermuda, British Virgin Islands, Cayman Islands, Curaçao Island, El Salvador, Grenada, Guadeloupe, Martinique, Montserrat, Saint Kitts and Nevis, Saint Lucia, Saint Vincent and the Grenadines, Trinidad and Tobago, Turks and Caicos Islands, Virgin Islands (USA), Benin, Cape Verde, Comoros, Democratic Republic of the Congo, Republic of the Congo, Djibouti, Equatorial Guinea, Gabon, Gambia, Mauritius, Reunion, Saint Helena, Sao Tome and Principe, Seychelles, Togo
Stray: New Zealand
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae.
Refseq information: 2
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_020534231.1 XP_020389820.1 NW_018074309.1 135155 173563  (38408) + Reference ASM16 bnip3 -
2 MODEL XM_020534232.1 XP_020389821.1 NW_018074309.1 135155 173563  (38408) + Reference ASM16 bnip3 -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 12
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAis_active_nucleusComponent21873635
2Danio rerioIBAis_active_nuclear envelopeComponent21873635
3Danio rerioIEAlocated_inmitochondrionComponentNot available
4Danio rerioIEAlocated_inmitochondrial envelopeComponentNot available
5Danio rerioIBAis_active_mitochondrial outer membraneComponent21873635
6Danio rerioIBAis_active_endoplasmic reticulumComponent21873635
7Danio rerioIEAlocated_inmembraneComponentNot available
8Danio rerioIEAlocated_inintegral component of membraneComponentNot available
9Danio rerioIEAacts_upstrpositive regulation of apoptotic processProcessNot available
10Danio rerioIBAinvolved_iregulation of programmed cell deathProcess21873635
11Danio rerioIBAinvolved_ipositive regulation of programmed cell deathProcess21873635
12Danio rerioIBAinvolved_imitochondrial outer membrane permeabilizationProcess21873635

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