A database of hypoxia responsive genes in fishes
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Gene Information
Upstream Analysis
Pattern analysis
HRE analysis
Sequence Analysis
Similarity search
mRNA alignment
Finding ORFs
Primer design
Multiple sequence alignment
About Database
Gene details for the gene Hypoxia inducible factor 1 subunit alpha (Gene Id: 109522901 Symbol: hif1a)
Hippocampus comes
[Tiger tail seahorse, Tiger-tail seahorse ]
Family:
Syngnathidae
Habitat:
Saltwater
Conservation status (2015):
Vulnerable (VU)
Occurrence and distribution
Native:
Indonesia, Malaysia, Philippines, Singapore, Thailand, Vietnam
Systematics
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae.
Refseq information: 5
SNo.
Status
RNA nucleotide accession
Protein accession
Genomic nucleotide accession
Start position on genomic DNA
End position on genomic DNA
Orientation
Assembly
Symbol
UniProtkb ID
1
MODEL
XM_019881733.1
XP_019737292.1
NW_017805678.1
99715
114387 (14672)
-
Reference H_com
hif1aa
-
2
MODEL
XR_002169655.1
-
NW_017805678.1
99715
114387 (14672)
-
Reference H_com
hif1aa
-
3
MODEL
XR_002169656.1
-
NW_017805678.1
99715
114387 (14672)
-
Reference H_com
hif1aa
-
4
MODEL
XR_002169657.1
-
NW_017805678.1
99715
114387 (14672)
-
Reference H_com
hif1aa
-
5
MODEL
XR_002169658.1
-
NW_017805678.1
99715
114387 (14672)
-
Reference H_com
hif1aa
-
mRNA analysis
Promoter analysis of gene:
Primere design of mRNA:
Similarity search :
Analysis of homologous transcript:
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