Mode 2 : SSR Primer Design (FASTA + MISA)

Upload a FASTA file together with the corresponding MISA catalog. Primer3 will design primers flanking each SSR region in the background.

Upload the DNA sequences in FASTA format.
Upload the SSR catalogue generated by MISA.
Example: 100-300
Maximum primer pairs to design for each SSR.
Back to Home
Input
FASTA + MISA
Output
TSV
Engine
Primer3
Mode
SSR Flanking Primers