Fish and Shellfish Microsatellite Database
 
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  Top 10 FishMicrosat Families  
Family Species
Cyprinidae 39
Serranidae15
Scombridae 11
Pomacentridae 9
Salmonidae9
Cichlidae 9
Bagridae8
Lutjanidae8
Poeciliidae7
Gobiidae6
 
  Top 10 FishMicrosat Species  
Species Records
Cyprinus carpio42000
Lates calcarifer3681
Ctenopharyngodon idella3363
Oncorhynchus mykiss2674
Hypophthalmichthys molitrix1365
Carassius auratus717
Hypophthalmichthys nobilis640
Labeo rohita637
Penaeus monodon618
Pagrus major597
  Primer design

Repeats information
SpeciesRepeatsRepeats regionSequence lengthAccession no.
Labeo rohita(CA)8(AC)9343..376575 bpJN581361

Sequence
GATCTCACATTCCTAATATATATATATATACACATATATATACACACACACACACACACACACACACACACACACATGTT
GTGTTTCCATGTTTTATGGGTTCATTCCATAGGCGTAATGATTTCTATACTGTACAAACCGTACTTTCTATCGCCCTACA
CCTAAACCTAGTCCTCACAGGAGACTGTGCACACTTTTACTTTCTCAAAAAACCTCATTCTGCATGATTTATAAGCCTGT
TTCCTCATGGGGACCTCACAAATGTCCCCACAAGGTCAAATTTTACTGGTATTACTATCCTTGTGGGGACATTTGGTCCC
ATAACGTGATGAATACCAGGTGCACACACACACACACAACACACACACACACACACAACACACACACACACGCACACACA
CACACGCACAACACACACACACACACACACACACACACATACACACACAGACACACACACACACACACACACACAACACA
CACACACATACACACACAGCTGTAGTGATTGTTGTTGTGTTATAAATGTGTCTGTTCTTGTGTTCAGATGCCTGTTTTCT
CACACTGGATCCCAA

Primers information
Warning: Length of flanking regions are not enough to design primer sequences for slected locus.
 
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