Scyliorhinus canicula [Small-spotted catshark, Gildan ] Family:Scyliorhinidae Habitat: Saltwater Conservation status (2015): Not Reported |
Occurrence and distribution |
Native: Israel, Egypt, Syria, Lebanon, Turkey, Algeria, Libya, Morocco, Mauritania, Senegal, UK, Germany, France, Spain, Portugal, Italy, Greece, Norway, Sweden, Denmark, Iceland, Ireland, Belgium, Netherlands, Albania, Bosnia and Herzegovina, Croatia, Cyprus, Gibraltar, Isle of Man, Malta, Monaco, Montenegro, Slovenia, Tunisia, Western Sahara
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Systematics | Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae. |
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Refseq information: 1
SNo. |
Status |
RNA nucleotide accession |
Protein accession |
Genomic nucleotide accession |
Start position on genomic DNA |
End position on genomic DNA |
Orientation |
Assembly |
Symbol |
UniProtkb ID |
1 |
MODEL |
XM_038783049.1 |
XP_038638977.1 |
NC_052167.1 |
22712415 |
22777437 (65022) |
+ |
Reference sScyC |
hif1an |
- |
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mRNA analysis |
Promoter analysis of gene: |
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Primere design of mRNA: |
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Similarity search : |
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Analysis of homologous transcript: |
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GO Term: 31 |
SNo. | Reported in speceis | Evidence | Qualifier | GO term | Category |
PubMed Link |
1 | Danio rerio | IBA | is_active_ | nucleus | Component | 21873635 | 2 | Danio rerio | IEA | located_in | nucleus | Component | Not available | 3 | Danio rerio | ISS | colocalize | nucleus | Component | Not available | 4 | Danio rerio | IBA | is_active_ | cytoplasm | Component | 21873635 | 5 | Danio rerio | IEA | located_in | cytoplasm | Component | Not available | 6 | Danio rerio | ISS | located_in | cytoplasm | Component | Not available | 7 | Danio rerio | ISS | enables | ferrous iron binding | Function | Not available | 8 | Danio rerio | ISS | enables | zinc ion binding | Function | Not available | 9 | Danio rerio | IEA | enables | oxidoreductase activity | Function | Not available | 10 | Danio rerio | IBA | enables | 2-oxoglutarate-dependent dioxygenase activity | Function | 21873635 | 11 | Danio rerio | IGI | acts_upstr | regulation of vascular endothelial growth factor receptor signaling pathway | Process | 25347788 | 12 | Danio rerio | ISS | enables | carboxylic acid binding | Function | Not available | 13 | Danio rerio | IBA | involved_i | peptidyl-histidine hydroxylation | Process | 21873635 | 14 | Danio rerio | ISS | involved_i | peptidyl-histidine hydroxylation | Process | Not available | 15 | Danio rerio | IBA | enables | peptidyl-histidine dioxygenase activity | Function | 21873635 | 16 | Danio rerio | ISS | enables | peptidyl-histidine dioxygenase activity | Function | Not available | 17 | Danio rerio | IBA | enables | peptidyl-asparagine 3-dioxygenase activity | Function | 21873635 | 18 | Danio rerio | ISS | enables | peptidyl-asparagine 3-dioxygenase activity | Function | Not available | 19 | Danio rerio | IBA | involved_i | peptidyl-aspartic acid hydroxylation | Process | 21873635 | 20 | Danio rerio | ISS | involved_i | peptidyl-aspartic acid hydroxylation | Process | Not available | 21 | Danio rerio | IBA | involved_i | peptidyl-asparagine hydroxylation | Process | 21873635 | 22 | Danio rerio | ISS | involved_i | peptidyl-asparagine hydroxylation | Process | Not available | 23 | Danio rerio | ISS | enables | protein homodimerization activity | Function | Not available | 24 | Danio rerio | IBA | involved_i | negative regulation of Notch signaling pathway | Process | 21873635 | 25 | Danio rerio | IEA | enables | metal ion binding | Function | Not available | 26 | Danio rerio | ISS | located_in | perinuclear region of cytoplasm | Component | Not available | 27 | Danio rerio | IEA | enables | dioxygenase activity | Function | Not available | 28 | Danio rerio | IBA | involved_i | negative regulation of transcription from RNA polymerase II promoter in response to hypoxia | Process | 21873635 | 29 | Danio rerio | IBA | enables | ankyrin repeat binding | Function | 21873635 | 30 | Danio rerio | IDA | acts_upstr | negative regulation of vasculature development | Process | 25347788 | 31 | Danio rerio | IMP | acts_upstr | negative regulation of vasculature development | Process | 25347788 |
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