A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Aryl hydrocarbon receptor nuclear translocator-like 1b (Gene Id: 118228371  Symbol: arntl1b)

Anguilla anguilla     [European eel]     Family:Anguillidae    Habitat: Saltwater and freshwater    Conservation status (2015): Endangered (EN)
Occurrence and distribution Not established: China, Japan, Indonesia, Taiwan, Jordan, Eritrea, USA, Brazil
Introduced: Israel, Iran, Myanmar, Kenya, Slovakia
Native: Egypt, Syria, Lebanon, Turkey, Russia, Algeria, Libya, Morocco, Mauritania, UK, Germany, France, Spain, Portugal, Italy, Greece, Bulgaria, Ukraine, Romania, Georgia, Norway, Sweden, Denmark, Iceland, Ireland, Finland, Belgium, Netherlands, Albania, Austria, Belarus, Bosnia and Herzegovina, Croatia, Cyprus, Czech Republic, Estonia, Faroe Islands, Gibraltar, Isle of Man, Latvia, Lithuania, Malta, Moldova, Monaco, Poland, Serbia, Slovenia, Switzerland, Tunisia, Western Sahara
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae.
Refseq information: 5
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_035419834.1 XP_035275725.1 NC_049205.1 51134967 51153120  (18153) + Reference fAngA arntl1b -
2 MODEL XM_035419835.1 XP_035275726.1 NC_049205.1 51134967 51153120  (18153) + Reference fAngA arntl1b -
3 MODEL XM_035419836.1 XP_035275727.1 NC_049205.1 51134967 51153120  (18153) + Reference fAngA arntl1b -
4 MODEL XM_035419837.1 XP_035275728.1 NC_049205.1 51134967 51153120  (18153) + Reference fAngA arntl1b -
5 MODEL XM_035419838.1 XP_035275729.1 NC_049205.1 51134967 51153120  (18153) + Reference fAngA arntl1b -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 22
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIDAlocated_inchromatinComponent27171500
2Danio rerioIBAenablesRNA polymerase II cis-regulatory region sequence-specific DNA bindingFunction21873635
3Danio rerioIBAenablesDNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
4Danio rerioIDAcontributeDNA bindingFunctionNot available
5Danio rerioIEAenablesDNA bindingFunctionNot available
6Danio rerioIDAenableschromatin bindingFunction25673850
7Danio rerioIEAenablesDNA-binding transcription factor activityFunctionNot available
8Danio rerioIPIenablesprotein bindingFunction17785416
9Danio rerioIBAis_active_nucleusComponent21873635
10Danio rerioIEAlocated_innucleusComponentNot available
11Danio rerioIEApart_oftranscription regulator complexComponentNot available
12Danio rerioIPIpart_oftranscription regulator complexComponentNot available
13Danio rerioIEAlocated_incytoplasmComponentNot available
14Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
15Danio rerioIBAinvolved_iregulation of transcription by RNA polymerase IIProcess21873635
16Danio rerioIBAinvolved_icircadian rhythmProcess21873635
17Danio rerioIEPacts_upstrphotoperiodismProcessNot available
18Danio rerioIGIacts_upstrregulation of gene expressionProcess27171500
19Danio rerioIGIacts_upstrpositive regulation of gene expressionProcess27171500
20Danio rerioIBApart_ofaryl hydrocarbon receptor complexComponent21873635
21Danio rerioIEAenablesprotein dimerization activityFunctionNot available
22Danio rerioIDApart_ofCLOCK-BMAL transcription complexComponent29447387

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