A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Aryl hydrocarbon receptor nuclear translocator (Gene Id: 118225484  Symbol: arnt)

Anguilla anguilla     [European eel]     Family:Anguillidae    Habitat: Saltwater and freshwater    Conservation status (2015): Endangered (EN)
Occurrence and distribution Not established: China, Japan, Indonesia, Taiwan, Jordan, Eritrea, USA, Brazil
Introduced: Israel, Iran, Myanmar, Kenya, Slovakia
Native: Egypt, Syria, Lebanon, Turkey, Russia, Algeria, Libya, Morocco, Mauritania, UK, Germany, France, Spain, Portugal, Italy, Greece, Bulgaria, Ukraine, Romania, Georgia, Norway, Sweden, Denmark, Iceland, Ireland, Finland, Belgium, Netherlands, Albania, Austria, Belarus, Bosnia and Herzegovina, Croatia, Cyprus, Czech Republic, Estonia, Faroe Islands, Gibraltar, Isle of Man, Latvia, Lithuania, Malta, Moldova, Monaco, Poland, Serbia, Slovenia, Switzerland, Tunisia, Western Sahara
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae.
Refseq information: 5
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_035413954.1 XP_035269845.1 NC_049201.1 70229726 70247784  (18058) + Reference fAngA arnt -
2 MODEL XM_035413963.1 XP_035269854.1 NC_049201.1 70229726 70247784  (18058) + Reference fAngA arnt -
3 MODEL XM_035413972.1 XP_035269863.1 NC_049201.1 70229726 70247784  (18058) + Reference fAngA arnt -
4 MODEL XM_035413981.1 XP_035269872.1 NC_049201.1 70229726 70247784  (18058) + Reference fAngA arnt -
5 MODEL XM_035413983.1 XP_035269874.1 NC_049201.1 70229726 70247784  (18058) + Reference fAngA arnt -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 18
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAenablesRNA polymerase II cis-regulatory region sequence-specific DNA bindingFunction21873635
2Danio rerioIBAenablesDNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
3Danio rerioIEAenablesDNA bindingFunctionNot available
4Danio rerioIEAenablesDNA-binding transcription factor activityFunctionNot available
5Danio rerioIBAis_active_nucleusComponent21873635
6Danio rerioIEAlocated_innucleusComponentNot available
7Danio rerioIEApart_oftranscription regulator complexComponentNot available
8Danio rerioIEAlocated_incytoplasmComponentNot available
9Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
10Danio rerioIBAinvolved_iregulation of transcription by RNA polymerase IIProcess21873635
11Danio rerioIPIacts_upstrresponse to xenobiotic stimulusProcess16306231
12Danio rerioIMPacts_upstrresponse to toxic substanceProcess16936225
13Danio rerioIBApart_ofaryl hydrocarbon receptor complexComponent21873635
14Danio rerioIPIenablessequence-specific DNA bindingFunction16306231
15Danio rerioIPIacts_upstrpositive regulation of transcription, DNA-templatedProcess16306231
16Danio rerioIEAenablesprotein dimerization activityFunctionNot available
17Danio rerioIGIacts_upstrpositive regulation of hypoxia-inducible factor-1alpha signaling pathwayProcess32379754
18Danio rerioIMPacts_upstrnegative regulation of glucocorticoid receptor signaling pathwayProcess32379754

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