A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Aryl hydrocarbon receptor nuclear translocator-like 2 (Gene Id: 117447822  Symbol: arntl2)

Pseudochaenichthys georgianus          Family:-    Habitat: -    Conservation status (2015): -
Occurrence and distribution -
Systematics
Refseq information: 5
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_034084725.1 XP_033940616.1 NC_047508.1 23596772 23614437  (17665) + Reference fPseG arntl2 -
2 MODEL XM_034084726.1 XP_033940617.1 NC_047508.1 23596772 23614437  (17665) + Reference fPseG arntl2 -
3 MODEL XM_034084727.1 XP_033940618.1 NC_047508.1 23596772 23614437  (17665) + Reference fPseG arntl2 -
4 MODEL XM_034084728.1 XP_033940619.1 NC_047508.1 23596772 23614437  (17665) + Reference fPseG arntl2 -
5 MODEL XM_034084729.1 XP_033940620.1 NC_047508.1 23596772 23614437  (17665) + Reference fPseG arntl2 -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 16
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAenablesRNA polymerase II cis-regulatory region sequence-specific DNA bindingFunction21873635
2Danio rerioIBAenablesDNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
3Danio rerioIEAenablesDNA bindingFunctionNot available
4Danio rerioIEAenablesDNA-binding transcription factor activityFunctionNot available
5Danio rerioIPIenablesprotein bindingFunctionNot available
6Danio rerioIBAis_active_nucleusComponent21873635
7Danio rerioIEAlocated_innucleusComponentNot available
8Danio rerioIEApart_oftranscription regulator complexComponentNot available
9Danio rerioIEAlocated_incytoplasmComponentNot available
10Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
11Danio rerioIBAinvolved_iregulation of transcription by RNA polymerase IIProcess21873635
12Danio rerioIGIacts_upstrcircadian rhythmProcess15657039
13Danio rerioIGIacts_upstrresponse to light stimulusProcess15657039
14Danio rerioIEPacts_upstrphotoperiodismProcessNot available
15Danio rerioIBApart_ofaryl hydrocarbon receptor complexComponent21873635
16Danio rerioIEAenablesprotein dimerization activityFunctionNot available

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