A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Aryl hydrocarbon receptor nuclear translocator (Gene Id: 115373385  Symbol: arnt)

Myripristis murdjan     [Pinecone soldierfish]     Family:Holocentridae    Habitat: Saltwater    Conservation status (2015): Not Reported
Occurrence and distribution Native: India, China, Japan, Indonesia, Malaysia, Sri Lanka, Philippines, Thailand, Taiwan, South Korea, Maldives, Vietnam, Saudi Arabia, Israel, Egypt, Myanmar, Jordan, Oman, Yemen, Hong Kong, Cambodia, Australia, Papua New Guinea, South Africa, Tanzania, Madagascar, Somalia, Kenya, Mozambique, Sudan, Eritrea, American Soma, Hawaii, Fiji, French Polynesia, Guam, Kiribati, Marshall Islands, Micronesia, New Caledonia, Samoa, Solomon Islands, Tonga, Vanuatu, Comoros, Djibouti, Mauritius, Reunion, Seychelles
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Holocentriformes; Holocentridae.
Refseq information: 8
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_030071739.1 XP_029927599.1 NC_043995.1 20048389 20059261  (10872) + Reference fMyrM arnt -
2 MODEL XM_030071740.1 XP_029927600.1 NC_043995.1 20048389 20059261  (10872) + Reference fMyrM arnt -
3 MODEL XM_030071741.1 XP_029927601.1 NC_043995.1 20048389 20059261  (10872) + Reference fMyrM arnt -
4 MODEL XM_030071742.1 XP_029927602.1 NC_043995.1 20048389 20059261  (10872) + Reference fMyrM arnt -
5 MODEL XM_030071743.1 XP_029927603.1 NC_043995.1 20048389 20059261  (10872) + Reference fMyrM arnt -
6 MODEL XM_030071744.1 XP_029927604.1 NC_043995.1 20048389 20059261  (10872) + Reference fMyrM arnt -
7 MODEL XM_030071745.1 XP_029927605.1 NC_043995.1 20048389 20059261  (10872) + Reference fMyrM arnt -
8 MODEL XM_030071746.1 XP_029927606.1 NC_043995.1 20048389 20059261  (10872) + Reference fMyrM arnt -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 18
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAenablesRNA polymerase II cis-regulatory region sequence-specific DNA bindingFunction21873635
2Danio rerioIBAenablesDNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
3Danio rerioIEAenablesDNA bindingFunctionNot available
4Danio rerioIEAenablesDNA-binding transcription factor activityFunctionNot available
5Danio rerioIBAis_active_nucleusComponent21873635
6Danio rerioIEAlocated_innucleusComponentNot available
7Danio rerioIEApart_oftranscription regulator complexComponentNot available
8Danio rerioIEAlocated_incytoplasmComponentNot available
9Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
10Danio rerioIBAinvolved_iregulation of transcription by RNA polymerase IIProcess21873635
11Danio rerioIPIacts_upstrresponse to xenobiotic stimulusProcess16306231
12Danio rerioIMPacts_upstrresponse to toxic substanceProcess16936225
13Danio rerioIBApart_ofaryl hydrocarbon receptor complexComponent21873635
14Danio rerioIPIenablessequence-specific DNA bindingFunction16306231
15Danio rerioIPIacts_upstrpositive regulation of transcription, DNA-templatedProcess16306231
16Danio rerioIEAenablesprotein dimerization activityFunctionNot available
17Danio rerioIGIacts_upstrpositive regulation of hypoxia-inducible factor-1alpha signaling pathwayProcess32379754
18Danio rerioIMPacts_upstrnegative regulation of glucocorticoid receptor signaling pathwayProcess32379754

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