A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Aryl hydrocarbon receptor nuclear translocator-like 2 (Gene Id: 114559765  Symbol: arntl2)

Perca flavescens     [American yellow perch, Lake perch ]     Family:Percidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: USA, Canada
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Percina; Hypohomus.
Refseq information: 5
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_028584623.1 XP_028440424.1 NC_041338.1 27471970 27495653  (23683) - Reference PFLA_ arntl2 -
2 MODEL XM_028584624.1 XP_028440425.1 NC_041338.1 27471970 27495653  (23683) - Reference PFLA_ arntl2 -
3 MODEL XM_028584626.1 XP_028440427.1 NC_041338.1 27471970 27495653  (23683) - Reference PFLA_ arntl2 -
4 MODEL XM_028584627.1 XP_028440428.1 NC_041338.1 27471970 27495653  (23683) - Reference PFLA_ arntl2 -
5 MODEL XM_028584628.1 XP_028440429.1 NC_041338.1 27471970 27495653  (23683) - Reference PFLA_ arntl2 -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 16
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAenablesRNA polymerase II cis-regulatory region sequence-specific DNA bindingFunction21873635
2Danio rerioIBAenablesDNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
3Danio rerioIEAenablesDNA bindingFunctionNot available
4Danio rerioIEAenablesDNA-binding transcription factor activityFunctionNot available
5Danio rerioIPIenablesprotein bindingFunctionNot available
6Danio rerioIBAis_active_nucleusComponent21873635
7Danio rerioIEAlocated_innucleusComponentNot available
8Danio rerioIEApart_oftranscription regulator complexComponentNot available
9Danio rerioIEAlocated_incytoplasmComponentNot available
10Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
11Danio rerioIBAinvolved_iregulation of transcription by RNA polymerase IIProcess21873635
12Danio rerioIGIacts_upstrcircadian rhythmProcess15657039
13Danio rerioIGIacts_upstrresponse to light stimulusProcess15657039
14Danio rerioIEPacts_upstrphotoperiodismProcessNot available
15Danio rerioIBApart_ofaryl hydrocarbon receptor complexComponent21873635
16Danio rerioIEAenablesprotein dimerization activityFunctionNot available

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