A database of hypoxia responsive genes in fishes
 
  Gene details for the gene Aryl hydrocarbon receptor nuclear translocator-like 2 (Gene Id: 108239981  Symbol: arntl2)

Kryptolebias marmoratus     [Mangrove rivulus, Matanzas rivulus ]     Family:Rivulidae    Habitat: Freshwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: USA, Mexico, Brazil, Venezuela, French Guiana, Cuba, Jamaica, Puerto Rico, Anguilla, Antigua and Barbuda, Aruba, Bahamas, Barbados, Belize, British Virgin Islands, Cayman Islands, Curaçao Island, Grenada, Guadeloupe, Martinique, Montserrat, Saint Kitts and Nevis, Saint Lucia, Saint Vincent and the Grenadines, Trinidad and Tobago, Turks and Caicos Islands, Virgin Islands (USA)
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae.
Refseq information: 2
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_037978019.1 XP_037833947.1 NC_051440.1 18297112 18308933  (11821) - Reference ASM16 arntl2 A0A0A7D859
2 PROVISIONAL NM_001329351.1 NP_001316280.1 NC_051440.1 18297112 18308933  (11821) - Reference ASM16 arntl2 A0A0A7D859
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 16
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAenablesRNA polymerase II cis-regulatory region sequence-specific DNA bindingFunction21873635
2Danio rerioIBAenablesDNA-binding transcription factor activity, RNA polymerase II-specificFunction21873635
3Danio rerioIEAenablesDNA bindingFunctionNot available
4Danio rerioIEAenablesDNA-binding transcription factor activityFunctionNot available
5Danio rerioIPIenablesprotein bindingFunctionNot available
6Danio rerioIBAis_active_nucleusComponent21873635
7Danio rerioIEAlocated_innucleusComponentNot available
8Danio rerioIEApart_oftranscription regulator complexComponentNot available
9Danio rerioIEAlocated_incytoplasmComponentNot available
10Danio rerioIEAacts_upstrregulation of transcription, DNA-templatedProcessNot available
11Danio rerioIBAinvolved_iregulation of transcription by RNA polymerase IIProcess21873635
12Danio rerioIGIacts_upstrcircadian rhythmProcess15657039
13Danio rerioIGIacts_upstrresponse to light stimulusProcess15657039
14Danio rerioIEPacts_upstrphotoperiodismProcessNot available
15Danio rerioIBApart_ofaryl hydrocarbon receptor complexComponent21873635
16Danio rerioIEAenablesprotein dimerization activityFunctionNot available

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