A database of hypoxia responsive genes in fishes
 
  Gene details for the gene BCL2 interacting protein 3 (Gene Id: 105903328  Symbol: bnip3)

Clupea harengus     [Atlantic herring, Baltiyskaya sel'd' ]     Family:Clupeidae    Habitat: Saltwater    Conservation status (2015): Least Concern (LC)
Occurrence and distribution Native: Russia, UK, Germany, France, Norway, Sweden, Denmark, Iceland, Ireland, Greenland, Finland, Belgium, Netherlands, USA, Canada, Faroe Islands, Isle of Man, Latvia, Lithuania, Poland, Svalbard and Jan Mayen
Questionable: Estonia
Systematics Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; environmental samples.
Refseq information: 1
SNo. Status RNA nucleotide accession Protein accession Genomic nucleotide accession Start position on genomic DNA End position on genomic DNA Orientation Assembly Symbol UniProtkb ID
1 MODEL XM_012831060.3 XP_012686514.1 NC_045174.1 4808379 4814021  (5642) + Reference Ch_v2 bnip3 -
 
mRNA analysis Promoter analysis of gene: Primere design of mRNA:
Similarity search : Analysis of homologous transcript:
 
 
GO Term: 12
SNo.Reported in speceisEvidenceQualifierGO termCategory PubMed Link
1Danio rerioIBAis_active_nucleusComponent21873635
2Danio rerioIBAis_active_nuclear envelopeComponent21873635
3Danio rerioIEAlocated_inmitochondrionComponentNot available
4Danio rerioIEAlocated_inmitochondrial envelopeComponentNot available
5Danio rerioIBAis_active_mitochondrial outer membraneComponent21873635
6Danio rerioIBAis_active_endoplasmic reticulumComponent21873635
7Danio rerioIEAlocated_inmembraneComponentNot available
8Danio rerioIEAlocated_inintegral component of membraneComponentNot available
9Danio rerioIEAacts_upstrpositive regulation of apoptotic processProcessNot available
10Danio rerioIBAinvolved_iregulation of programmed cell deathProcess21873635
11Danio rerioIBAinvolved_ipositive regulation of programmed cell deathProcess21873635
12Danio rerioIBAinvolved_imitochondrial outer membrane permeabilizationProcess21873635

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